Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01840 ATGGGGGCTGGTGGCCGAACCTTTGTTCCTCCTTCCAACAGGAAATCAGAAGTCGACCCTCTAAAGCGGGTGCCATGTGAAAAACCTCCTTTTAGCCTCAGCCAGATCAAGAAGGCCATCCCACCTCACTGTTTCCAGCGCTCTGTTCTCCGCTCATTCTCCTATGTGATTTACGATCTAACCATAGCCTTCTGCCTCTATTATGTTGCCACCCATTACTTTCACACCCTTCCCCATCCTCTGTCTTTCCTTGCATGGCCAATCTACTGGGCTTTCCAAGGTTGTATCCTCACTGGCGTTTGGGTCATTGCTCATGAGTGTGGCCACCATGCATTCAGTGACTACCAGCTGCTTGATGATATCGTTGGCCTTGTTCTCCATTCTGCTCTCCTAGTCCCATACTTTTCATGGAAATACAGCCATCGCCGTCATCACTCCAACACCGGTTCTCTTGAGCGGGATGAAGTATTTGTGCCAAAGCAGAAGTCCGGTATGCAGTGGTTCTCTAAATACCTTAACAATCCACCAGGCAGAGTCCTCACACTACTCGTCACCCTCACTCTTGGTTGGCCCATGTACCTGGCTTTTAATGTGTCAGGCAGGCCTTATCCAAGGTTTGCTTGCCACTATGATCCTTATGGTCCTATTTACACCGATCGTGAACGACTTCAAATTTATATATCAGATGCTGGAATAGTTGCAGTATGCTATGGCCTTTACCATCTTGCCATGACAAAAGGGTTTGCCTGGGTGGTGTGTGTTTATGGAGTTCCTTTGCTAATTGTCAATGGATTTCTGGTGTTGATTACATTCTTGCAGCACACTCACCCTGCATTGCCGCACTACAATTCCTCTGAGTGGGACTGGTTGAGAGGAGCTTTGGCAACAATTGACAGAGATTATGGAATTCTGAACAAGGTCTTCCATAATATTACAGACACTCATGTGGCACATCACTTGTTCTCCACAATGCCGCATTATCATGCAATGGAGGCTACAAAAGCAATTAGGCCCATTTTGGGAGAGTATTATCGACTTGACGAGACTCCATTTGTGAAGGCAATGTGGAGAGAGGCAAGAGAGTGTCTTTACGTGGAGCCAGATCACGGTACTGAGAACAAAGGTGTATTTTGGTACAACAATAAGTTGTGA 1152 0.467 MGAGGRTFVPPSNRKSEVDPLKRVPCEKPPFSLSQIKKAIPPHCFQRSVLRSFSYVIYDLTIAFCLYYVATHYFHTLPHPLSFLAWPIYWAFQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSGMQWFSKYLNNPPGRVLTLLVTLTLGWPMYLAFNVSGRPYPRFACHYDPYGPIYTDRERLQIYISDAGIVAVCYGLYHLAMTKGFAWVVCVYGVPLLIVNGFLVLITFLQHTHPALPHYNSSEWDWLRGALATIDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYRLDETPFVKAMWREARECLYVEPDHGTENKGVFWYNNKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01840 383 CDD Delta12-FADS-like 47 329 - -
Viun1g01840 383 MobiDBLite consensus disorder prediction 1 21 - -
Viun1g01840 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 16 382 IPR012171 GO:0016491
Viun1g01840 383 Pfam Domain of unknown function (DUF3474) 25 66 IPR021863 GO:0016717
Viun1g01840 383 Pfam Fatty acid desaturase 85 345 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01840 Viun-Chr1 30120287 30126066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01840 1 383 Lipid Metabolism Gene Families AT3G12120 75.979 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01840 K10256 - gmx:547815 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01840 1 30120287 30126066 Viun1g01840 1 30120287 30126066 ECH
Viun1g01840 1 30120287 30126066 Viun7g00322 7 2308955 2310522 PCT