Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01818 ATGACGGAACCAACGGAGCCATCCACCTCATCTTCATTGGCGAGGGACCCAGGCACCGTGATTCACCCAAGGCGCGAGCCCTTCGAACACGGTCTCTTGCCAATCCCACGACTCATCTTCTCCGACCCCGCGCAAACCCTAATTCCGTTGAAGCAGAAGCTTCTACAGTTATCCTCCAACCAGCGAGTCGACTCGGTGGCCATCTCCGACTCACTTCAGATCTCCATTGAGCACGCCAGGCTCGTCCTCGATACCCTCGCCTCGATTCTGCACTCCGATTCCGAACCTCTCACCGCCGCAAAGTTCGGCGAAATCGATTCCGTCGGCGTCGACGTGCATGATCTGGTATTGTTCCTCTACATTCAATCCTACAAGAGACTCCTCCCGCGGACGCACAAGGACTCCGCCGCCATCGCCGATGTCTGGCCTTCTACTTCCGCCTTCGATGGCTACTTATCCGCTCTCTCGCCGCTTCAGCTTGTACGCAGCAACAGTCGGCGGTTTATGCCTTCTCAGGCCGATGAAGAGGCACATCAGTTGTCGTATCTCCAGAAACACTTGGCTAACATAATGTCTCTTTTAGCAGAGCCTGTAGAGGGAGAAGGCGAAGAGTCTCTGGTTTTAACAATGGATAGATTCGAGCATCTTGGGTTTCTATTTCAGTTTGGTGATAAGGGATTGGAAGGAAATTCTTTTAGTCAATGTTCTCCTTTTTTTGCAAACTCAGACCCTGACATGCCTGCTGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAAAACATAGTGGCTACTTTGGAATATATTTCTGAACGAACTTCTTCTAAGGAAAATGGCCCATCTAGTGCCTCTGATCAGGATGTTGCCATGACTGATGCAAGTACTGTGTCAGTTAAGGTCTCAACAAGTAATAGAGGTGCTAGTTTCATTGAAGGGATATCTAAGTCATCATATACGAAGAATGCATCTGACATTAAAGGTTCTTCTGTGAAGGTTCTTAATTGCCACGAGTCTGCCATCTACATCCTAGCACCATTGAGATACGCCACTGTCTATGGATGTTCGGATGCAACAATAGTTCTTGGAGCAGTTGGCAAGGCTGTGAGAGTAGAACACTGTGAACGTGTTCATGTAATTGTAGCAGCAAAACGTATTTGTATTGCTAATTGCCGTGAATGTATTTTCTTTTTGGGAGTGAATCAGCAACCACTTATGCTTGGTGATAACCATAAGCTGCAGGTGGCTCCCTATAATACATTTTACTCCCAATTGGAGGAGCATATGAATGAAGTTGGAATTGTTCCTACAGTGAACCGGTGGGATGAACCTCTTGCATTGGGCATGGTTGATCCTCATGATTCATTATCTCATCCAGCAGGTGTTTCTGATGTTCAAGCCGAGTCTGCTACCCAGGTGGACCCTGATCAGTTCACTAGTTTTGTGATTCCGAGCTGGCTTGGAGGAGACTCCACTGGTTCTGCACAAGGCAATCCATTCACTCTACCAGATGCTTACAAGGCATCTCAGCATAAAAATCACAAAAATTTAGGGGAGATAAGGCAACTCATAAGGGAAGCATCTTTAGAAGAAAGTCGCAAACGAGAGTTGTCATCTGCACTCCATGTGTACTTCAAGGACTGGTTATATGCTTCTGGAAACATTCGTCAGCTTTATTGTCTACAAGGCGATTGA 1698 0.4717 MTEPTEPSTSSSLARDPGTVIHPRREPFEHGLLPIPRLIFSDPAQTLIPLKQKLLQLSSNQRVDSVAISDSLQISIEHARLVLDTLASILHSDSEPLTAAKFGEIDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAIADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANIMSLLAEPVEGEGEESLVLTMDRFEHLGFLFQFGDKGLEGNSFSQCSPFFANSDPDMPAVPVPAAQVHDWLLQNIVATLEYISERTSSKENGPSSASDQDVAMTDASTVSVKVSTSNRGASFIEGISKSSYTKNASDIKGSSVKVLNCHESAIYILAPLRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECIFFLGVNQQPLMLGDNHKLQVAPYNTFYSQLEEHMNEVGIVPTVNRWDEPLALGMVDPHDSLSHPAGVSDVQAESATQVDPDQFTSFVIPSWLGGDSTGSAQGNPFTLPDAYKASQHKNHKNLGEIRQLIREASLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01818 565 PANTHER UNCHARACTERIZED 19 563 IPR039589 -
Viun1g01818 565 Pfam Tubulin binding cofactor C 329 444 IPR012945 -
Viun1g01818 565 Gene3D - 309 480 IPR016098 -
Viun1g01818 565 SMART carp 337 374 IPR006599 -
Viun1g01818 565 SMART carp 375 409 IPR006599 -
Viun1g01818 565 MobiDBLite consensus disorder prediction 1 22 - -
Viun1g01818 565 MobiDBLite consensus disorder prediction 1 16 - -
Viun1g01818 565 ProSiteProfiles C-CAP/cofactor C-like domain profile. 299 435 IPR017901 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01818 Viun-Chr1 29932060 29940382 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01818 K16810 - gmx:100780410 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01818 1 29932060 29940382 Viun1g01818 1 29932060 29940382 ECH