Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01816 ATGACGGAACCAACGGAGCCATGCACGTCTTCTTCGTTGGCGAGGGACTCTACCACCGTGATTCACCCAAGGCGGGAGCCCTTTGAGCACGGCCTCTTGCCAATCCCACGCCTCATTTTCTCCGACCCCGCGCAAACCCTAATTCCGTTGAAGAAGAAGCTTCTAGAGTTATCCTCCAACCATCGAGTCGGCTCGGCGGCCATCTCTGAGGCATTGCAGATCTCCATTGAGCACGCCAGACTCGTCATCGATACGCTCGCCTCGATTCTGCCATCCGACTCCGAACCTCTTGTCGCCGCAAAGCTCGGCGAAGCCGATTCCGTCGGCGTCGACGTGCATGATCTGGTACTGTTTCTCTACATTCAATCCTACAAGAGGCTCCTCCCGCGGACGCACAAGGACTCCGCTGCCGTCGTCGATGTCTGGCCTTCCACTTCCGCCTTCGATGGCTACTTGTCCGCCCTCTCGCCGCTTCAGCTTGTTCGCAGCAACAGTAGGCGGTTTATGCCATCGCAGAGTGATGAAGAGGCGCATCAGTTGTCATATCTGCAAAAACACTTGTCTAACATTCTGTCTCTTCTAGCAGAGCCTGTGGATGGAGAAGGCGAAGAATCTATGGTTTTAACCATGGATAGTTTTGAGCACCTTGGGTTTCTAATTCAGTTTGGTGACAAGGGATCTGAAGGAAATTCTTTCAGTCAATTTTCTCCCTTTTTTGCAAATTCAGATCCTGACATGCCTGCTGTTCCTGTTCCTGCTGCTCAAGTTCATGATTGGCTTCTACAAAATATTGCTGCTGCTTTGGAATATATTTCTGAACGGACTTCTTCTAAGGAAAATGGGCCAGTTTCTCCTTCTGATCACGATGTTGCTATGACTGATGCATCCAGTCCCTCAGTTAATAAGGTCTCAACCAGTACTAGAGGTGCAAGTTTCATTGAAGGGATTTCCAAATCGTCATATATGAAGCATGCACCCGACGTTAAAGGTTCTACTGTTAAGGTTCTAAATTGCCACGAGTCTGCCATATACATCTTAGCTCCTTTGAGATATGCTACTGTCTATGGGTGTTCAGATGCAACAATAGTTCTGGGAGCAGTAGGCAAGGCTGTCAGAGTAGAACATTGTGAAAGAGTTCATGTAATCGTAGCAGCAAAACACATTTGTATTGCTAATTGTCGGGAATGTGTTTTCTTTTTGGGAGTGAACCAGCAACCTCTTATTGTTGGTGATAACCATAAACTGCAGAATATAGGTTGGTACCTACAGAACATGGTGCTCTTCGTTGAGGTGTAG 1296 0.4807 MTEPTEPCTSSSLARDSTTVIHPRREPFEHGLLPIPRLIFSDPAQTLIPLKKKLLELSSNHRVGSAAISEALQISIEHARLVIDTLASILPSDSEPLVAAKLGEADSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAVVDVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQSDEEAHQLSYLQKHLSNILSLLAEPVDGEGEESMVLTMDSFEHLGFLIQFGDKGSEGNSFSQFSPFFANSDPDMPAVPVPAAQVHDWLLQNIAAALEYISERTSSKENGPVSPSDHDVAMTDASSPSVNKVSTSTRGASFIEGISKSSYMKHAPDVKGSTVKVLNCHESAIYILAPLRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKHICIANCRECVFFLGVNQQPLIVGDNHKLQNIGWYLQNMVLFVEV 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01816 431 PANTHER UNCHARACTERIZED 18 416 IPR039589 -
Viun1g01816 431 SMART carp 376 410 IPR006599 -
Viun1g01816 431 SMART carp 338 375 IPR006599 -
Viun1g01816 431 Gene3D - 303 423 IPR016098 -
Viun1g01816 431 ProSiteProfiles C-CAP/cofactor C-like domain profile. 285 431 IPR017901 -
Viun1g01816 431 MobiDBLite consensus disorder prediction 275 303 - -
Viun1g01816 431 Pfam Tubulin binding cofactor C 331 415 IPR012945 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01816 Viun-Chr1 29912941 29927790 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01816 K16810 - gmx:100819271 736.487