Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01799 ATGGGTTTGGAGTTGTTCTTTTGGCTTATCATTTGTTTCCCTTTCCACATCGCTTTTTTAGCCTCCACGTTCTACCAGGTTTTGATGCTGACTGACTTAGAAGCCGATTTTATCAACCCATATGATGCTTCATCAAGGATTAATTACTTCATCGTTCCTGAGTTTATTGGGCAGGGATTGTTGTGCGCTTTCTGCCTTTTAACAGGTCACTGGATCATGTTTTTGATGACGGTTCCTGTTACATGCTACCATGTGATGCTGTACATGAAACAGCAGCATCTCATCGATGTTACTGAAGTGTTTAGAGTACTTAACTCTGAGAAGAAATTTCGCTTGGCCAAACTTGCGTATTACTTAACAATCATCATTATAACTGTCTTCAGGCTTGTATTGATGCTTGTCAACTATTTAGATTTTGAAGATGAATGA 429 0.3893 MGLELFFWLIICFPFHIAFLASTFYQVLMLTDLEADFINPYDASSRINYFIVPEFIGQGLLCAFCLLTGHWIMFLMTVPVTCYHVMLYMKQQHLIDVTEVFRVLNSEKKFRLAKLAYYLTIIIITVFRLVLMLVNYLDFEDE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01799 142 PANTHER CORNICHON-RELATED 4 127 - -
Viun1g01799 142 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Viun1g01799 142 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01799 Viun-Chr1 29762095 29765902 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01799 K20368 - gmx:100527262 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01799 1 29762095 29765902 Viun1g01799 1 29762095 29765902 ECH
Viun1g01799 1 29762095 29765902 Viun7g00372 7 2626639 2630301 PCT