Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01788 ATGAAAGAAATTGAGAAGAGAAAAGCTTCAAGAAATAGTCAGACAAAGGGTTCAAGAAAAACCGAAAGGAGAGAGAGTAAATTGCAACAAGATAATTCTTCCAAAAAAATGAGTGAAAAAAGAATTGAATCTAAGACACTCCATGATAGTAGACCAACTGCAAATAATACTATAAGTGATTCCAACACGGCCTCGGAGAATTCAGAAACTTATGAAAATGTGGTTATACATTACCTGGACGATGTGAACAGGTCTGAGGAGGCACTTGCCGAGATGAAAGTCAATGAAATGGTTGCTAGTGAAAACAAAAATGAAGTGGCTGATGATCATTCTACTGATTTGGAGAAAGAGCAAAAGGAAGGGAATGACGAAGTATCAGATGCTGAGACAGTAAAGGATTCAGTATCTTCCCAAGGCGATTCTTTGACAAATGAGGATGAGAGAACTGAAGTGGCTTCAAAAGATCCTAAAAGTAAGGTTAGAGTGAGTCCTCCAGAAAACAACCGTGGTTCAAAGGAGAGATCTGATAAAAAAGCAAATAAATTGCAATCAAAGGTATCAAATGGCAATCAAAAGAAGCCTATGAACTCAAATAAAGGGACCTTCACCGTGGCAGACAAAAATACTTCCTCAACCAATTCTAAGACTGTAAAAGTTCCTGTAAATGTTTTGTCGGACTCTTCTGAAGGTGTTGATGAAAAACCTGTTCAAGAGATCAAGGAACTTGATATTGTGGATGGATCCCCCAATGGTGCTCAGAGCATAGGAATTGAATATGAAAGTCATGAAACGGTTAATGCTGAAGAAAATGATGAACGTGAGGATGAGGCAAATGTGGAATTAAAAATTGAAGAAATGCAATTACGAATTGAAAAGCTGGAAGAGGAACTTAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTATTGTACCAGAGCATGGAAGCTCGGGACACAAGGTGCACACACCAGCTCGGCGCCTTTCTAGGCTCTATATACATGCTTGTAAGCATTGGACCCAGAAAAGGCGAGCCACAATTGCCAAGAATGCTGTTTCTGGCCTCATTTTGGTTGCTAAGTCTTGTGGTAATGATGTTTCAAGGTTAACTTTCTGGTTGTCAAATACCGTTGCGCTGAGAGAGATAATTTCACAAGCTTTTGGGAGTTCATGTCAAGCTAGTCCCCTTAAAAGGTTGGCAGAGTCAAATGGGAAGTATACTGCACTGAAACGGAAAAGTAGCACAAATGGTAAACCAGGAAGTGGTTTTATGCCTCTCGTTGAAGATTGGCAAGAGACAGGAACCTTTACCTTTGCTTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGATAGTGGAGTCAGTGTGGTGGCAGGCTTTGACTCCCTATATGCAGTCTCCAGTTGGGAACTCTTCAAATAAATCTATTGGGAAGCTGATGGGACCTGCTCTGGGTGATCACAATCAAGGAAATTTTTCCATCAATCTTTGGAGAAATGCTTTCCAAGATGCCTTTCAACGACTCTGTCCTGTTCGAGCAGGAGGACATGAGTGTGGTTGTTTGCCCGTATTGGCTAGAATGGTCATGGAACAATGCATAGCTAGACTAGACATTGCTATGTTCAATGCTATTCTTCGGGAGTCAGACCTTGAGATCCCAACTGATCCTATATCTGACCCTATTGTTGATTCAAAGGTTTTGCCAATTCCAGCTGGGAATTTAAGCTTTGGGTCTGGTGCACAGCTTAAAAACTCTGTTGGCAATTGGTCTAGATGGCTCACTGACATGTTTGGCATGGATGTTGAAGATTGTCCACAAGAAGATCAGGAGGAGAACAGTGAGAATGATGAAAAGCAGGGTGGGGTTGGTGAACCTAAGTCTTTTGTTCTCCTAAACGACTTGAGTGACCTTCTGATGCTGCCTAAAGACATGCTTATAGATAGAAAAATCAGACAAGAGGTGTGTCCTTCCATCAGTCTGTCATTGGTTATACGGGTTCTCTGTAACTTCACTCCTGATGAGTTCTGTCCAGACTTTGTTCCAGGAACTGTCTTGGAGGCCCTGAACGCAGAGACTATTATAGAGAGAAGATTGTCATCAGAGGCTGTAAGAAGCTTCCCCTATGTAGCTGCTCCTGTTGTGTACAAGCCTCCCTCTTCTGGTAATGTGGCTGAGAAAGTTGCAGAGGCTGGAGGAAAGTGTGAGTTGGGAAGAAATGTATCAGATGTTCAGAGAAGAGGGTACACCAGTGATGAAGAGCTAGAGGAACTTGATTCCCCTCTTACATCCATCATTGATAAGCTTCCTTCATCTCCACGAGTCACTCATAATGGAAAAGGTAATCACAACCCCACCACAAATGCTAGATACCAGCTACTACGTGAAGTTTGGTCCATGTGA 2400 0.4188 MKEIEKRKASRNSQTKGSRKTERRESKLQQDNSSKKMSEKRIESKTLHDSRPTANNTISDSNTASENSETYENVVIHYLDDVNRSEEALAEMKVNEMVASENKNEVADDHSTDLEKEQKEGNDEVSDAETVKDSVSSQGDSLTNEDERTEVASKDPKSKVRVSPPENNRGSKERSDKKANKLQSKVSNGNQKKPMNSNKGTFTVADKNTSSTNSKTVKVPVNVLSDSSEGVDEKPVQEIKELDIVDGSPNGAQSIGIEYESHETVNAEENDEREDEANVELKIEEMQLRIEKLEEELREVAALEVSLYSIVPEHGSSGHKVHTPARRLSRLYIHACKHWTQKRRATIAKNAVSGLILVAKSCGNDVSRLTFWLSNTVALREIISQAFGSSCQASPLKRLAESNGKYTALKRKSSTNGKPGSGFMPLVEDWQETGTFTFALERVESWIFSRIVESVWWQALTPYMQSPVGNSSNKSIGKLMGPALGDHNQGNFSINLWRNAFQDAFQRLCPVRAGGHECGCLPVLARMVMEQCIARLDIAMFNAILRESDLEIPTDPISDPIVDSKVLPIPAGNLSFGSGAQLKNSVGNWSRWLTDMFGMDVEDCPQEDQEENSENDEKQGGVGEPKSFVLLNDLSDLLMLPKDMLIDRKIRQEVCPSISLSLVIRVLCNFTPDEFCPDFVPGTVLEALNAETIIERRLSSEAVRSFPYVAAPVVYKPPSSGNVAEKVAEAGGKCELGRNVSDVQRRGYTSDEELEELDSPLTSIIDKLPSSPRVTHNGKGNHNPTTNARYQLLREVWSM 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01788 799 MobiDBLite consensus disorder prediction 143 181 - -
Viun1g01788 799 MobiDBLite consensus disorder prediction 49 70 - -
Viun1g01788 799 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 239 797 IPR021827 GO:0005643
Viun1g01788 799 MobiDBLite consensus disorder prediction 102 130 - -
Viun1g01788 799 MobiDBLite consensus disorder prediction 766 788 - -
Viun1g01788 799 MobiDBLite consensus disorder prediction 1 70 - -
Viun1g01788 799 MobiDBLite consensus disorder prediction 1 48 - -
Viun1g01788 799 MobiDBLite consensus disorder prediction 182 213 - -
Viun1g01788 799 Coils Coil 276 303 - -
Viun1g01788 799 MobiDBLite consensus disorder prediction 605 624 - -
Viun1g01788 799 MobiDBLite consensus disorder prediction 95 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01788 Viun-Chr1 29646179 29651271 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01788 - - pvu:PHAVU_001G137700g 1356.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01788 1 29646179 29651271 Viun1g01788 1 29646179 29651271 ECH