Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01778 ATGGCTATTGCTGCAGCAGCTGTTGTCGTGCCATTGGGTCTCCTCTTCTTCGCCTCCGGCCTCCTTGTCAATCTCATTCAGGCGATATGCTATGTTGTATTAAGGCCGGTGTCGAAGAATTTGTACCGACGGATCAACCGGGTTGTAGCGGAACTGTTGTGGCTGGAGCTTGTTTGGCTTATTGATTGGTGGGCAGGAGTTAAGGTCCAAATATTCACAGATCATGAAACCTTTCGTTTAATGGGTAAAGAGCATGCGCTTGTGATAAGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTCAGCTCAGCGTTCAGGTTGCCTTGGCAGCACTCTAGCTGTGATGAAGAAATCTTCAAAGTTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTTCTGGAGAGAAGTTGGGCTAAGGATGAAAGCACATTAAGGTTAGGCATCCAACGACTGAGTGATTATCCTCTTCCCTTTTGGTTAGCTCTCTTCGTAGAAGGAACACGCTTTACACAGGCCAAACTGTTAGCTGCTCAGGAATATGCAACTTCCACTGGATTGCCTGTCCCTAGAAATGTTTTAATTCCAAGAACTAAGGGTTTTGTTTCTGCAGTAAGTCATATGCGCTCATTTGTTCCTGCCATTTATGATGTAACAGTAGCTGTCCCCAAGAATTCCCCTGCTCCTACAATGCTAAGACTCTTCAAAGGGCAACCTTCAGTGGTGCATGTTCACATCAAGCGGCATTTAATGAAGGAAATGCCAGAAACAGATGAGGCCGTTGCTCAATGGTGTAGAGATATATTCGTGGCCAAGGATGCTCTATTAGACAAACATATGGCTGAGGATACTTTTAGTGACAAAGAGCTGCAGGATGCTGGTCGACCAATAAAGTCTCTTGTGGTAGTGATATCTTGGGCCTGTCTGGTTGTTGCGGGGTTTCTAAAGTTCCTACAATGGTCTTCACTACTATCTTCATGGAAGGGTGTTGCATTCTCAGCTTTTGGTTTGACAGTTGTTACTGCACTTATGCAAATTTTGATTCAATTCTCACAGTCAGAGCGTTCAAACCCTACCAAGATCGCCCCTGCTCAATCAAAAAACAAGGGGGAATTAGAGGCTATGAATGAGAAGAAACAGTAG 1161 0.4462 MAIAAAAVVVPLGLLFFASGLLVNLIQAICYVVLRPVSKNLYRRINRVVAELLWLELVWLIDWWAGVKVQIFTDHETFRLMGKEHALVISNHRSDIDWLVGWVSAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLRLGIQRLSDYPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAVPKNSPAPTMLRLFKGQPSVVHVHIKRHLMKEMPETDEAVAQWCRDIFVAKDALLDKHMAEDTFSDKELQDAGRPIKSLVVVISWACLVVAGFLKFLQWSSLLSSWKGVAFSAFGLTVVTALMQILIQFSQSERSNPTKIAPAQSKNKGELEAMNEKKQ 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01778 386 CDD LPLAT_LCLAT1-like 62 253 - -
Viun1g01778 386 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 37 283 - -
Viun1g01778 386 SMART plsc_2 86 208 IPR002123 GO:0016746
Viun1g01778 386 Pfam Acyltransferase 80 228 IPR002123 GO:0016746
Viun1g01778 386 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 9 359 - -
Viun1g01778 386 MobiDBLite consensus disorder prediction 363 386 - -
Viun1g01778 386 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01778 Viun-Chr1 29507387 29518264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01778 3 385 Miscellaneous Gene Families AT3G57650 73.629 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01778 K13523 - gmx:100812696 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01778 1 29507387 29518264 Viun1g01778 1 29507387 29518264 ECH