Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01775 ATGGAGAGTAGAGTCAGTAGTAAGAAAGCATCACCTCCATCTTCGCAGCAATTCATCTCTGTTACCACCCCTCTGCTTGATTTGGAAAAGGAAACTGGGGAATCAAGCATAGGAGTGTTTCACGAGAGGGAGACAGAGGATGCTGAGAAATATGAATTGGAAGTTGATGACTCTCCCATTGAGCAAGTGAGGCTAACAGTTCCAATCACCGATGACCCTACTCAGCCAGCACTAACATTTAGGACATGGATTCTGGGGTTGGTATCATGTGTGCTTCTTGCCTTTGTGAACCAATTTTTTAGCTACAGAACCAACCCTTTACAAATATCTTCAGTCTCAGCACAGATTGCTACACTCCCACTTGGCAAACTGATGGCTGCAACTCTTCCGACTAAACCAATTCGAGTGCCATTCACGAAATGGTCATTTTCAATGAATCCGGGGCCATTCACTTTGAAGGAGCATGTGCTTATCACCATCTTTGCTACATCTGGATCTAGTGGTGTTGATGCAATCAGCATCATCACAATTGTTAAGGCTTTCTATCACAGGAGCATCCATCCAGTAGCAGCTTATTTGTTAGTAATGTCAACCCAAATGCTTGGGTATGGATGGGCTGGGATTTTTAGAAGATTCTTAGTTGACTCCCCATTTATGTGGTGGCCTCAAAACCTTGTGCAGGTGTCTCTATTCAAGGCATTTCATGAAAAAGAAAAAAGGCCTAAAGGAGGATACACTAGGATACAATTCTTTTTCCTAGTCTTTGTAGCGAGCTTTGCCTATTACACTCTTCCAGGGTACCTTTTCCAAGCAATATCAACCATCTCCTTTGTTTGCTTGATTTGGAATGATTCCATCACGGCCCAACAAATTGGTTCAGGCATGAATGGAATTGGCATAGGCTCATTTGGCCTCGATTGGAACACTGTTGCAGCCTTCTTAGGTAGTCCTTTAGCTGTACCTGGCTTTGCCATCATCAACATGTTAATAGGATTTATGCTGGATATGTATGTTCTGATTCCCCTTGCCTATTGGACCAATTTATATGATGCCAAAAAGTTCCCCCTCATTAGTTCTCACACGTTTGACGCAACTGGTGCAACATATAATGTTACTCGTGTTCTAAATCCCAGAACTTTTGACATTGATTTGGATAGTTATAACAATTACAGCAAGATCTATCTTAGTATAACATTTGCATTTGAGTATGGATTAAGCTTTGCAATTTTGACTGCCACTATTTCCCACGTTGTCCTCTTCCATGGAGAGATGATTTTTCAGACATGGAGGAAGACAACAAGAGCACCAAAGGAACAACTTGCAGATGTCCATACAAGAATTATGAAGAAAAACTATGAACAAGTCCCTGAATGGTGGTTTGCCACTATTTTGACCCTTATGGTTGTTGTGGCTCTGGTTGCTTGTGAGTGTTTTGGGAAGCAACTCCAACTGCCATGGTGGGGAATTTTACTTTCTCTAACAATTGCATTAGTCTTCACCTTGCCAATTGGGGTTATTGTAGCTACAACAAACATAAAAACAGGACTCAACGTGATTTCAGAGTTAATAATTGGATTCATTTACCCAGGAAAACCCCTTGCTAATGTAGTCTTCAAGATTTATGGACATGACAGCATGGTACAGGCAGTTTCGTTTCTTAGTGACTTCAAATTAGGCCACTACATGAAAATTCCTCCTAAATCTATGTTCATTGTTCAGCTTGTAGGCACAGTTGTTGCTTCAACTGTCTACTTTGCCACATCTTGGTGGCTTCTAACATCTATTGAAAACATTTGTGATGAATCATTGTTGCCAAAGGGTAGTCCATGGACATGCCCTGGTGACGATGTGTTCTATAATGCTTCAATCATATGGGGAGTTGTAGGACCACAGAGAATGTTTGCCAAGGATGGTGTTTACCCAGGGATGAATTGGTTTTTCCTTATTGGTCTACTTGCTCCCATTCCAGTGTGGTTGCTTTCTCGTAAATTCCCCAACCACAAGTGGATTGGACTCATCAACATTCCCATTATCGCTGCAGGTGCATCCAACATTCCACCAGCCAGATCAGTGAATTATATTACATGGGGTATTGTTGGAATCTTCTTCAATTTCTATGTTTATAGAAAGTTTAAGGCATGGTGGGTCCGGCATACTTACATTCTTTCAGCTGCTTTGGATGCTGGAGTTGCTTTCATGAGTGTGATCCTTTATTTCACCCTTCAATCTAATGGTATTTTTGGTCCAGCCTGGTGGGGTCTTGATGCAGACCACTGTCCTTTGGCCAAATGCCCCACAGATCCAGGTGTATATGCTGAGGGATGTCCTATTCTTTGA 2337 0.4185 MESRVSSKKASPPSSQQFISVTTPLLDLEKETGESSIGVFHERETEDAEKYELEVDDSPIEQVRLTVPITDDPTQPALTFRTWILGLVSCVLLAFVNQFFSYRTNPLQISSVSAQIATLPLGKLMAATLPTKPIRVPFTKWSFSMNPGPFTLKEHVLITIFATSGSSGVDAISIITIVKAFYHRSIHPVAAYLLVMSTQMLGYGWAGIFRRFLVDSPFMWWPQNLVQVSLFKAFHEKEKRPKGGYTRIQFFFLVFVASFAYYTLPGYLFQAISTISFVCLIWNDSITAQQIGSGMNGIGIGSFGLDWNTVAAFLGSPLAVPGFAIINMLIGFMLDMYVLIPLAYWTNLYDAKKFPLISSHTFDATGATYNVTRVLNPRTFDIDLDSYNNYSKIYLSITFAFEYGLSFAILTATISHVVLFHGEMIFQTWRKTTRAPKEQLADVHTRIMKKNYEQVPEWWFATILTLMVVVALVACECFGKQLQLPWWGILLSLTIALVFTLPIGVIVATTNIKTGLNVISELIIGFIYPGKPLANVVFKIYGHDSMVQAVSFLSDFKLGHYMKIPPKSMFIVQLVGTVVASTVYFATSWWLLTSIENICDESLLPKGSPWTCPGDDVFYNASIIWGVVGPQRMFAKDGVYPGMNWFFLIGLLAPIPVWLLSRKFPNHKWIGLINIPIIAAGASNIPPARSVNYITWGIVGIFFNFYVYRKFKAWWVRHTYILSAALDAGVAFMSVILYFTLQSNGIFGPAWWGLDADHCPLAKCPTDPGVYAEGCPIL 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01775 778 NCBIfam OPT family oligopeptide transporter 62 742 IPR004813 GO:0035673
Viun1g01775 778 NCBIfam small oligopeptide transporter, OPT family 56 743 IPR004648 GO:0055085
Viun1g01775 778 MobiDBLite consensus disorder prediction 1 20 - -
Viun1g01775 778 Pfam OPT oligopeptide transporter protein 78 740 IPR004813 GO:0035673
Viun1g01775 778 PANTHER ISP4 LIKE PROTEIN 51 777 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01775 Viun-Chr1 29485804 29488838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01775 56 778 Organic Solute Cotransporters AT4G26590 66.160 0.0 1033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01775 - - gmx:100820498 1399.03