Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01764 ATGACTGTCACACCTAAGATCTCCGTGAACGATAAGAATTTGGTTGTTCATGGCAAGACCATATTAACCGGTGTACCGGACAACATTGTGCTGACTCCAGGATCTGGAAGTGGCCTTGTGACTGGTGCTTTTGTTGGTGCTAATGCTTCCCATAGTAAAAGTCTCCATGTGTTTCCAATGGGTGTCTTAGAGGAGCTCCGGTTCATGTGTTGCTTCCGGTTCAAATTATGGTGGATGACTCAGAGAATGGGAACTTGTGGGAGGGATGTTCCTCTGGAGACACAGTTCATGCTGATTGAGAGCAAAGAGAGTGAAGTGGATGGAGATAATTCTCCAACCATCTACACCGTCTTTCTTCCTCTTCTCGAAGGTCCATTCCGTGCTGTTCTTCAAGGCAATGAGAAGAACGAGATAGAGATTTGTCTTGAGAGTGGGGACAACGCGGTTGAGACTGATCAAGGCCTTCACCTAGTTTACATGCATGCTGGGACCAACCCCTTTGAAGTCATCAATCAAGCAGTGAAGGCTGTGGAAAAACACATGCAAACTTTTCTTCACCGTGAGAAGAAAAAGTTGCCATCTTTTCTTGACTGGTTTGGCTGGTGTACATGGGATGCTTTCTATACTGATGTCACAGCTGAGGGTGTTGAGGAAGGCCTGAAAAGTCTATCTGAGGGAGCTACACCACCACGGTTCCTCATCATAGATGATGGCTGGCAACAGATCGAAAGTAAACAAAAGGATCTTGACTGTGTTGTACAAGAAGGGGCACAGTTTGCTACTAGGCTGACTGGTATTAGAGAGAATACTAAATTTCAGAAGAAAACACAGAACAATGAGCAGACATCAGGTCTGAAGCATTTAGTAGAAGGAGTAAAGCAGCATCACAACGTGAAAAATGTTTATGTATGGCATGCACTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCAACTGGCATGGAGCATTATGACACTGCCTTGGCATATCCAGTGCAGTCACCAGGTGTACTGGGAAACCAACCAGACATTGTCATGGACAGCTTGGCCGTACATGGCCTAGGCCTAGTGCATCCAAAGAAGGTTTTCAATTTCTACAATGAGCTCCATGCTTACTTGGCTTCTTGTGGAGTGGATGGAGTGAAGGTTGATGTGCAGAACATTATTGAGACCCTTGGTGCTGGACATGGTGGAAGAGTCTCTCTTACACGAAGCTATCATCACGCGCTTGAGGCTTCCATTGCTCGTAACTTCACTGACAATGGATGCATTGCTTGCATGTGTCACAACACTGATGGCCTTTACAGTTCTAAGCAAACCGCTGTTGTGAGAGCCTCTGATGATTTCTACCCTCGTGATCCTGCTTCCCACACCATCCATATTTCTTCTGTTGCGTATAACTCACTTTTCCTTGGAGAATTCATGCAACCTGATTGGGACATGTTTCATAGTTTACACCCTGCAGCAGAATATCATGCTGCAGCTCGTGCAATTGGTGGATGTCCGATTTATGTCAGTGACAAGCCAGGCAACCATAATTTTGATCTTCTTAAGAAGCTGATTCTTCCTGATGGTTCGGTTCTCCGAGCACAGTTACCAGGCAGGCCAACTCGTGATTCTCTGTTTGTTGATCCAGCCAGAGATGGGACTAGCTTGCTCAAAATCTGGAACATGAACAAATGCTCTGGAGTTGTTGGTGTGTTTAACTGCCAAGGTGCTGGTTGGTGCAAGATAGAGAAGAAAACTCGCATCCATGATACATCTCCCGGTACACTCACTGGCTCTGTCTGTGCCTCTGATGTTGACCTTATCACCCAAGTAGCAGGTCCTGAATGGCTTGGAGAGACCATTGTTTATGCTTACAGATCAGGGGAGGTGATTCGGCTACCAAAGGGGGTTTCTGTTCCGGTGACACTGAAAGTTCTTGAGTTTGAACTGTTCCATTTCTGTCCAATCCATGAAATAGCACCAGGTATTTCATTTGCAGCAATAGGGCTACTTGATATGTTCAACACTGGAGGAGCTGTGGAGCTGGTTGAAATTCACAGAGCCTCTGACAACAAACCAGAACTGTTTGATGGTGAGGTGTTATCAGAATTAACCTCTTCTCTGAGTCCTAACCGAGCAGCAACAGCAACTGTTTGTCTTAGAGTCAGGGGAAGAGGGAGGTTTGGAGTTTACTCCTCTGAACGCCCAGTGAAGTGTGTAGTAGGTGGCACTGAAACAGATTTCAACTATGAGTCAGAGACTGGGTTGGCAACCTTCTCCATCCCAGTTCCTCAAGAGGAGATGTATAGATGGGCAATAGAGATCCAAGTTTGA 2322 0.4604 MTVTPKISVNDKNLVVHGKTILTGVPDNIVLTPGSGSGLVTGAFVGANASHSKSLHVFPMGVLEELRFMCCFRFKLWWMTQRMGTCGRDVPLETQFMLIESKESEVDGDNSPTIYTVFLPLLEGPFRAVLQGNEKNEIEICLESGDNAVETDQGLHLVYMHAGTNPFEVINQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGATPPRFLIIDDGWQQIESKQKDLDCVVQEGAQFATRLTGIRENTKFQKKTQNNEQTSGLKHLVEGVKQHHNVKNVYVWHALAGYWGGVKPAATGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEASIARNFTDNGCIACMCHNTDGLYSSKQTAVVRASDDFYPRDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAAEYHAAARAIGGCPIYVSDKPGNHNFDLLKKLILPDGSVLRAQLPGRPTRDSLFVDPARDGTSLLKIWNMNKCSGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVCASDVDLITQVAGPEWLGETIVYAYRSGEVIRLPKGVSVPVTLKVLEFELFHFCPIHEIAPGISFAAIGLLDMFNTGGAVELVEIHRASDNKPELFDGEVLSELTSSLSPNRAATATVCLRVRGRGRFGVYSSERPVKCVVGGTETDFNYESETGLATFSIPVPQEEMYRWAIEIQV 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01764 773 Pfam Raffinose synthase or seed imbibition protein Sip1 7 756 IPR008811 -
Viun1g01764 773 Gene3D Aldolase class I 197 520 IPR013785 -
Viun1g01764 773 PANTHER - 1 771 IPR008811 -
Viun1g01764 773 SUPERFAMILY (Trans)glycosidases 195 529 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01764 Viun-Chr1 29376044 29380948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01764 1 556 Glycoside Hydrolase AT3G57520 83.124 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01764 K06617 - gmx:100807861 1429.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01764 1 29376044 29380948 Viun1g01764 1 29376044 29380948 ECH