LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun1g01750	ATGGCTGTGAAGGACGACGTGGAAATCGTGAAGGCTCGCATCGACAAGAGGGATTACAGAAGAGTCGTGCTTAGCAACTCGCTCCAAGTGCTCCTCATTAGCGACCCCGTTACCGATAAGTGTGCTGCTTCCATGAACGTTGGCGTCGGTTACTTCAGTGATCCTGCTGGCCTCGAAGGCCTCGCCCATTTCCTCGAGCACATGCTGTTTTATGCGAGTGAAAAATACCCAGTTGAAGATAGCTACTCCAAGTATATTAGTGAGCATGGAGGAAGCACCAATGCTTTTACAGCATCTGAACACACCAACTATTTTTTTGAAGTTAACACAGACGGCTTTGAAGAGGCCCTGGACAGGTTTGCTCAGTTCTTTACTAAACCATTGATGTCTCCTGATGCCACCATGAGGGAAATTAAAGCTGTTGATTCTGAAAACAAGAAGAATTTATTATCTGATGGATGGAGAATGAACCAGCTTCAGAAACATCTCAGTGATGAAGATCATCCATATCATAAATTTAGCACAGGGAACTGGGACACTTTGGAAGTTAAACCTAAAGCAAAAGGATTAGACCCAAGGAAGGAGCTTCTGAAGTTTTATGATGAAAACTATTCTGCTAATTTAATGCATCTAGTTATATACACAAATGAAAGCCTTGATAAAATTCAAAACCTTGTAGAAGAAAAGTTCCAGGATATTAGAAACACCGACAAAAGTTGTTTCCATCCTTGTGGTCAGCCATGCAAATCAGAACATTTGCAGATTCTTGTCAGGACTGTCCCAATAAAGCAAGGTCACAAATTGAGAATTGCATGGCCAATAACCCCTGAAATCCATCATTACACTGAAGGGCCAAGCAGGTATCTTGGGCATCTCATTGGTCATGAAGGAGAAGGGTCTTTATATTACATCTTGAAAAAATTGGGATGGGCTACAGGCTTGTCTGCAGGTGAATCAGATTGGAGTTTGGATTTCGGATTCTTTTCAGTTGTAATTGATCTTACTGATTCTGGTCACGAGCACGCAGAAGATATCATTGGGTTGTTGTTCAAATACATCGAGCTTCTACAACACTCTGGTGTTTGCGAATGGATTTTTCAAGAGCTTTCAGCAGTTTGCGAGACCAAGTTCCATTATCAGGACAAAATTCCTCCCAGTGACTATGTTGTTAATATTGCATCAAATATGCAGTTTTATCCTGTGAAAGATTGGTTGACAGGATCATCCTTGCCTTTTAAGTTTAGCCCAAATGTTATCCATATGGTACTAGATCAGCTTTCTCCAGACAACTTTCGAATCTTTTGGGAGTCTAAAAATTTTGAAGGGCATACTGATAAGGTGGAGCCATGGTATGGAACTGCGTATTCCCTTGAAAAGATCACTGGCTCTGTTATTCAGGGGTGGATGGCTTCTGCTCCTAATGAAAACATGCATCTTCCAGCTCCTAATAACTTCATTCCAACTGACTTGTCACTTAAAATTGTGCAAGAAAAGGTGAAGTTTCCAGTTTTGTTAAGCAGGTCAACTTATTCAGCCTTATGGTACAAGCCAGACACATTGTTTTCTACACCTAAGGCTAACGTTAAGATTGATTTCAATTGCCCATATGCTGGAAGCTCTCCTGAGGCTGAGGTTTTGGTGCATATTTTCACACAATTATTGATGGATTACTTGAATGACTATGCTTATTATGCTCAGATTGCTGGTCTATATTATAGCATAACTCACACAGATGGTGGTTTCCAGGTGACACTCTTCGGTTATAATCACAAGTTAAGGATTCTACTCGAAACAATAGTTGAAAAGATTGCAACATTTGAAGTGAAATCTGACAGGTTTTCTGTCATCAAGGAAATGGTAACCAAGGAATATCAGAATATGAAGTACCAACAACCTTATCAGCAGGCTATGTACTATTGCTCTTTGATCTTACAAGATCATACCTGGCCTTGGATAGAACAACTCGATGTGCTTCCTGCTCTTCAAGTTGAAGATGTTGCCAAATTTGTACCATTAATGCTCTCCAGGACTTTTTTAGAGTTCTATATAGCAGGGAACATTGAAAGCCATGAAGCAGAGTCAATGGTCAAGCACGTAGAAAATGTTCTCTTTAATTGTTCAAAACCTCTGTGCAAACCTTTATTCTCATCTCAACATTTGGCGAATAGAGTTGTTAAACTTCAAAGTGGCATGAATTACTTCTACCCTTCAGAATGTCTTAATCCTGAAAATGAGAATTCTGCTCTTCTGCACTATATACAAGTTGGTCGTGATGACTTTAAGCTGAATGTTAAACTTCAGCTTTTTGCTCTTGTTGCAAAGCAACCAACCTTTCATCAGCTACGATCGGTTGAGCAGCTGGGGTACATTACTGTGCTCTTGCAGAGGAATGATTGTGGTATACGTGGACTACAGTTTATTATCCAATCCACAGAAAAGTCTCCGGGGAACATTGAGCAAAGGATCGAGGCATTTCTCAAAATGTTTGAGACCAAGATTTATGAGATGACGATTGATGAGTTCAAGAGTAATGTAAATGCTTTGATAGATGTGAAGCTAGAGAAACACAAAAATTTGAGGGAAGAATCATCATTTTTCTGGCGAGAGATTAACGATGGTACTTTGAGGTTTGATAGGAGAGACCATGAGGTTGAAGCATTAAGGCAGCTCACTCGTCAAGAATTGATAGATTTCTTCAATGAATATGTGAAAGTTGGTGCAGATAGAAAGAAAACTTTAAGTGTGCGAATTCATGGGAACCGGCATTCATCTGAGTACAAAGCCGAAGTCTCAGAACCACACTTGGCTAGAATAGATAATATATTTACATTTAGAAGATCACAGTCTCTTTATGGTTCATTTAAAGGACTTTCTGGGCAGATGAAATTATAG	2892	0.3983	MAVKDDVEIVKARIDKRDYRRVVLSNSLQVLLISDPVTDKCAASMNVGVGYFSDPAGLEGLAHFLEHMLFYASEKYPVEDSYSKYISEHGGSTNAFTASEHTNYFFEVNTDGFEEALDRFAQFFTKPLMSPDATMREIKAVDSENKKNLLSDGWRMNQLQKHLSDEDHPYHKFSTGNWDTLEVKPKAKGLDPRKELLKFYDENYSANLMHLVIYTNESLDKIQNLVEEKFQDIRNTDKSCFHPCGQPCKSEHLQILVRTVPIKQGHKLRIAWPITPEIHHYTEGPSRYLGHLIGHEGEGSLYYILKKLGWATGLSAGESDWSLDFGFFSVVIDLTDSGHEHAEDIIGLLFKYIELLQHSGVCEWIFQELSAVCETKFHYQDKIPPSDYVVNIASNMQFYPVKDWLTGSSLPFKFSPNVIHMVLDQLSPDNFRIFWESKNFEGHTDKVEPWYGTAYSLEKITGSVIQGWMASAPNENMHLPAPNNFIPTDLSLKIVQEKVKFPVLLSRSTYSALWYKPDTLFSTPKANVKIDFNCPYAGSSPEAEVLVHIFTQLLMDYLNDYAYYAQIAGLYYSITHTDGGFQVTLFGYNHKLRILLETIVEKIATFEVKSDRFSVIKEMVTKEYQNMKYQQPYQQAMYYCSLILQDHTWPWIEQLDVLPALQVEDVAKFVPLMLSRTFLEFYIAGNIESHEAESMVKHVENVLFNCSKPLCKPLFSSQHLANRVVKLQSGMNYFYPSECLNPENENSALLHYIQVGRDDFKLNVKLQLFALVAKQPTFHQLRSVEQLGYITVLLQRNDCGIRGLQFIIQSTEKSPGNIEQRIEAFLKMFETKIYEMTIDEFKSNVNALIDVKLEKHKNLREESSFFWREINDGTLRFDRRDHEVEALRQLTRQELIDFFNEYVKVGADRKKTLSVRIHGNRHSSEYKAEVSEPHLARIDNIFTFRRSQSLYGSFKGLSGQMKL	963

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun1g01750	963	ProSitePatterns	Insulinase family, zinc-binding region signature.	50	73	IPR001431	GO:0004222\|GO:0006508
	Viun1g01750	963	Pfam	Peptidase M16 inactive domain	193	368	IPR007863	-
	Viun1g01750	963	Pfam	Peptidase M16 inactive domain	661	848	IPR007863	-
	Viun1g01750	963	Gene3D	-	498	724	-	-
	Viun1g01750	963	SUPERFAMILY	LuxS/MPP-like metallohydrolase	5	237	IPR011249	GO:0046872
	Viun1g01750	963	Pfam	Middle or third domain of peptidase_M16	377	656	IPR032632	-
	Viun1g01750	963	SUPERFAMILY	LuxS/MPP-like metallohydrolase	246	482	IPR011249	GO:0046872
	Viun1g01750	963	Gene3D	-	244	469	-	-
	Viun1g01750	963	SUPERFAMILY	LuxS/MPP-like metallohydrolase	724	951	IPR011249	GO:0046872
	Viun1g01750	963	FunFam	Insulin-degrading enzyme	498	724	-	-
	Viun1g01750	963	FunFam	Putative insulin-degrading enzyme	1	240	-	-
	Viun1g01750	963	FunFam	nardilysin isoform X1	243	469	-	-
	Viun1g01750	963	Gene3D	-	725	958	-	-
	Viun1g01750	963	Pfam	Insulinase (Peptidase family M16)	30	165	IPR011765	-
	Viun1g01750	963	FunFam	Insulin-degrading enzyme-like 1 peroxisomal	725	957	-	-
	Viun1g01750	963	Gene3D	-	2	237	-	-
	Viun1g01750	963	PANTHER	NARDILYSIN	3	947	-	-
	Viun1g01750	963	SUPERFAMILY	LuxS/MPP-like metallohydrolase	483	707	IPR011249	GO:0046872

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun1g01750	Viun-Chr1	29264432	29284639	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun1g01750	K01408		-	gmx:100804856	1786.93

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun1g01750	1	29264432	29284639	Viun1g01750	1	29264432	29284639	ECH