Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01743 ATGGCTGAATATTTTGTCTTCGAGATCGCTGAATCACTGTTAGGGAAGCTTGCGTCTAATCTTTATGAAGAAATATCTCGAGCCTTTGATCTGTATGAGGATGTGAAAAGTTTCAGAGACACCATGTCAATTGTAAAAGGCGTGCTGTTGGATGCTGAGGAGAAGAAGGACAAGAAGCATGGGTTGCGTGAATGGCTCAGGCAGATTCAAAACGTATGCTTAGATGCTGAAGATGTGTTAGATGGATTTGAGTGCCAAAACCTGAGAAAACAAGTTCTCAAAGCTTCAGGCACCACCAGCATGAAGGTAAACCACTTGTTTTCTTCATCTAATTCCCTTGTTTTCCGTTTTAGGATGGCCTGGCAAATAAAAAATGTCACACGTAGATTAGATAAGATAGCAGCTGATGGGAACAAGTTTGGTCTTGAGAGGATTGTTTTTTATCACAGCCCTATGCAAAGGAGAGAAATGACTTATTCTCATGTTGATGCTTCAGGGGTGATTGGAAGGGAGAAGGAGAAGGAAGAAATTATCAAGATTTTGATGCAACCCCACCCTCGTGGTGATGGTTATGGAGATCAAAATGTTTGTGTTATTCCCATAGTAGGTATCGGAGGGTTGGGGAAGACCACACTTGCAAAGTTGGTGTTCAATGATAAGAGAATGGATGATCTTTTCCAGTTGAAGATGTGGGTGTGTATCTCTGATGACTTTAACCTAAGGCAGATAATTATTAAAATCATCAACTCTGATTCTGATCCAACCATTTCTGTTGTTCCTCAAGAAAGCATGAACAACTTAGATATTGAGCAGTTACAAAGTCGTCTTAGACACAAACTTTCTTGTCAGAAGTATCTACTAGTCTTGGATGACGTATGGAATGATAATCGTGCAAAATGGATAGAGTTGAAAGATTTAATTAAAGTTGGTGCGTTGGGAAGCAAAATCATAGTGACAACACGAAGTAACTCAATTGCTTCAATGATGGGCACCGTTCCCTCCTATGTTTTAGAAGGTCTTTCTGTGGAGAATTGCTTATCTCTGTTTCTGAAATGGGCATTTAGGGAAGGTGAAGAAAAAGAACATCCAAATCTAGTGGATATTGGAAAAGAAATAGTGAAAAAATGCCGAGGAGTTCTACTAGCAGTGAAAACTTCAGGAAGTTCCCTGTTCTCAATTTTTGATTCGGAAAGATGGGAAATTATGAGAGACCACGAGCTATGGAACCTGAAACAACAGGAAGATGACATTTTACCTTCTCTAAAGTTGAGCTATGATCAAATGCCATCCTATTTGAGGCACTGTTTTGCTTTCTTTTCTCTTTATCCAAAAGATTTTGGCTTTACCAGTGCTGAAATTGCTAACTTTTGGGCCACACTTGGATTACTTCGATCTCCATTTGGAAGTCAGAAGATAGAGAATGTTGGAAAACTATATATTAATGAGTTACATTCAAGGTCATTTTTGGAGGACTTTGAGGACTTTGGCACAGTTTACTATTTTAAACTACATGATTTGGTACATGATCTTTCGCTGTATGTTGCGAAAGAGGAGTTTCTAATGGTGAACTCGCATACTAGCAATATACCCAAGCAAGTAAGGCATATATCAGTTGTTGAAAATGATTCACTAAGCCATACTTTGTTCCCCAAGTCCAGAGGTGTGAGAACTATAATATTTCCCGTTGATGGAGTGGGTGTTGGCAGTGAATCTCTTTTGGAAACTTGGATAAAAAGATACAAATACTTGCGGCATTTAGATTTAAGTAATTCCACTTTTGAGACACTTCCTAATTCAATTGCTAAATTGGAGCATCTGCGAGCTTTCAGTCTTGATAATAACTGCAAAATAAAAAGACTTCCGAATTCTTTTTGCAAACTCCAAAACTTAGAAATGTTGTCTTTAAGAAGATGTTTGGGGCTTGAAACATTGCCTAAAGGATTAGGGATGTTAATCAGCCTCCGAAAATTGTATATAACCACAAAACAGTCTATTTTGTCGGAGGATGACTTTGCAACCTTGAACAATCTTCATACTTTGATTTTTGAATACTGTGACAATTTGAAGTTTTTGTTCCAAGGGGCAGAAGCTCAACTCTCGTCCCTTGAAGTTTTGATCATTCAATCATGTGGGAGCCTAGAGTCCTTACCTCTGCATATTCTCCCTAAACTTCATGTTCTGATAGTAACAAGGTGCGTGATGCTAAACCTGTCATTGAACAGTGAAACAGCTATCCAAAGATTGAAGATGAAATATCTGCATATTGAGCAATGTCCACGGCAACAGACGCTGCCTGAATGGATTCAAGCAGCTGCCAACACTTTGAGAACATTGATAATTTTAAATTGTCATTGTCTTGAGGTGCTTCCCGAGTGGCTTAGCACACTCACTCAACTTAAGATGCTCCATATAGTTAACTGTCCTCAGTTGTTGGATTTCCCAAGTAACATGCACTGCCTAAGAGCCCTTGAAGATTTGATCATAGATGGTTATCCTGAATTGGGTCGAAAATGTGAACCACGTTCTGGTGAGTACTGGTCCTTCATTGCTCACATCAAATGTGTTTCCATTGGAAAAACAAGGAAAATGAAACTCCTTTTTCAAATGCTTTCACGACTGGGCTTGAACTGCACTCAGTAA 2640 0.3898 MAEYFVFEIAESLLGKLASNLYEEISRAFDLYEDVKSFRDTMSIVKGVLLDAEEKKDKKHGLREWLRQIQNVCLDAEDVLDGFECQNLRKQVLKASGTTSMKVNHLFSSSNSLVFRFRMAWQIKNVTRRLDKIAADGNKFGLERIVFYHSPMQRREMTYSHVDASGVIGREKEKEEIIKILMQPHPRGDGYGDQNVCVIPIVGIGGLGKTTLAKLVFNDKRMDDLFQLKMWVCISDDFNLRQIIIKIINSDSDPTISVVPQESMNNLDIEQLQSRLRHKLSCQKYLLVLDDVWNDNRAKWIELKDLIKVGALGSKIIVTTRSNSIASMMGTVPSYVLEGLSVENCLSLFLKWAFREGEEKEHPNLVDIGKEIVKKCRGVLLAVKTSGSSLFSIFDSERWEIMRDHELWNLKQQEDDILPSLKLSYDQMPSYLRHCFAFFSLYPKDFGFTSAEIANFWATLGLLRSPFGSQKIENVGKLYINELHSRSFLEDFEDFGTVYYFKLHDLVHDLSLYVAKEEFLMVNSHTSNIPKQVRHISVVENDSLSHTLFPKSRGVRTIIFPVDGVGVGSESLLETWIKRYKYLRHLDLSNSTFETLPNSIAKLEHLRAFSLDNNCKIKRLPNSFCKLQNLEMLSLRRCLGLETLPKGLGMLISLRKLYITTKQSILSEDDFATLNNLHTLIFEYCDNLKFLFQGAEAQLSSLEVLIIQSCGSLESLPLHILPKLHVLIVTRCVMLNLSLNSETAIQRLKMKYLHIEQCPRQQTLPEWIQAAANTLRTLIILNCHCLEVLPEWLSTLTQLKMLHIVNCPQLLDFPSNMHCLRALEDLIIDGYPELGRKCEPRSGEYWSFIAHIKCVSIGKTRKMKLLFQMLSRLGLNCTQ 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01743 879 PANTHER DISEASE RESISTANCE PROTEIN RP 63 821 IPR044974 GO:0006952
Viun1g01743 879 Gene3D Ribonuclease Inhibitor 517 853 IPR032675 -
Viun1g01743 879 SUPERFAMILY L domain-like 502 860 - -
Viun1g01743 879 Pfam Rx N-terminal domain 11 100 IPR041118 -
Viun1g01743 879 Pfam NB-ARC domain 172 426 IPR002182 GO:0043531
Viun1g01743 879 Gene3D - 153 334 IPR027417 -
Viun1g01743 879 Gene3D - 10 124 - -
Viun1g01743 879 Gene3D - 425 512 IPR036388 -
Viun1g01743 879 Pfam Leucine rich repeat 582 638 IPR001611 GO:0005515
Viun1g01743 879 Gene3D - 339 424 IPR042197 -
Viun1g01743 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 438 IPR027417 -
Viun1g01743 879 PRINTS Disease resistance protein signature 697 713 - -
Viun1g01743 879 PRINTS Disease resistance protein signature 376 390 - -
Viun1g01743 879 PRINTS Disease resistance protein signature 279 293 - -
Viun1g01743 879 PRINTS Disease resistance protein signature 198 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01743 Viun-Chr1 29205437 29208406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01743 571 828 Receptor kinase-like Gene Family AT1G28440 27.273 8.05e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01743 - - gmx:100794422 1310.43