Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01707 ATGTGCAGTTCAGTCCACAACAGCTGTTTCTTGAGTCGGAATTTGTGTTGTGTGTGTCATTGGCTTCCTCATCTATTTCCTCTTTTTTCACGCCTTAATCTCTCTGAAATTTGTAGCAGCATCCATCACTCTATGGAGTCTGTACTGGGTAATTGGCCATCCTATGACCCTCACAACTTCAGTCAGCTTCGACCTTCCGATCCTTCAAGTTCTTCTAAAATAGCACCGGCCACTTACCATCCTACTCACAGCAGGACCCTTCCACCACCTGATCAAGTGATAAGCACTGAGGCCAAAAATATCCTCCTGAGACATATCTATCAGCATGCTGAGGAGAAGTTGAAACCAAAAAGAGCAGCATCTGATAATCTTTTACCAGAGCATGGATGCAAGCAACCTAGAGTTTCCAGTTGA 414 0.4444 MCSSVHNSCFLSRNLCCVCHWLPHLFPLFSRLNLSEICSSIHHSMESVLGNWPSYDPHNFSQLRPSDPSSSSKIAPATYHPTHSRTLPPPDQVISTEAKNILLRHIYQHAEEKLKPKRAASDNLLPEHGCKQPRVSS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01707 137 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 44 135 IPR033575 GO:0032434
Viun1g01707 137 MobiDBLite consensus disorder prediction 60 92 - -
Viun1g01707 137 MobiDBLite consensus disorder prediction 114 137 - -
Viun1g01707 137 MobiDBLite consensus disorder prediction 60 79 - -
Viun1g01707 137 Pfam Det1 complexing ubiquitin ligase 48 112 IPR018276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01707 Viun-Chr1 28863437 28866474 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01707 K11792 - gmx:100784555 165.236