Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01683 ATGTCGTCTTCCGCCGCACTCCATTTCCAATCTCCGATAGACTCCGCGGAGGCGCCGCCGCATTCTTCCTTCCTTCATTTTAATGCTGACTGCTTAAACCCTTCCGTCTCCGCCGCGCGCACGAGGTCCCGACCGAGGTTAGTCAAACTGCGCAAGCAGTGTGCGTCTCAGCAGGCCAGGTCCCGGAACAGAGCTGGCGCCGACGACGGTGATGCCGGCTTCAATCCGTTTCGCGCTGATCAGGTAAACAGTAATGGTAGTATATTGGAGAGTGGTTTTTCGAACTCTCGTGGTGACAATGGTTTTGTGTTTGGTGCTGGGAAGGTTGAGTCTGACTCCTCTAGGGATTTGAATGGGGGAATCAGGAGTGGTGGTGTGGAATTTGTGTTTGGTGCTGGGAAGAGTGACGAGGGATCGATAAAGAACGGTGAGAGTGTTGCGGAGACGGTTTTTGGTGAGGGAGGGAAGGTGGGGTCGAATTCGGAGGGGGAGTTGAAGAGTAGAGTGTTTGTTTTTGGTACTTCTAGAGATAATTTGGATTCTGGCTTGAGTACAGAAAAGGGGAAATGTAGTGTGGGGTTGGGGGATTCGGGTGCGGTGAAGGAATGTAAGTATGAATTTGAGTGTGGACAACGTGATCACTTTGGGGGTAGCTATAGTGGTAGAGAGTCGAGTGTTAATTTATCAGATGAGATGGAGAAACTTAACATTAAACATTCTGAGGGTGTTGATATTACTGGGAATTCGAAGAATTCACATGCCAATGGTTGTGCTGCTGGTTTTGTTTTTGGAGGAAATGACATCGGTTTTGGTTATTCTAGTGTTAGTTCAAAAACCGAAGCTGGTGGTCAGCAGTTCTGTGCTCATGCTGCTTCTGGGAACGTTGGCGTTCAAAATGGAACTGCTTGCGGTATTTCCTCTGATTCTTCAGGAATACATTCTAAGCCATCCACTAGTCAGGAAGGCGTCACAGATTTCCAGAATGGCAAAAATCCAGGATGTTATGTGTCTGAAGATTCGAAAGTGAATGGAGCGGCAGCGTCATTTTCCTTCTCATCATTTGGTATTGATTCCCATCCAAACTATGCTTCCATGGGCCATTCTTCAAGTGCAGATGGTGATAAGGGCGATAATTGGTTTGCAAGTACTCCAGAGGCTTCCAAAGAGTCTTTTGCTGACTTCAAACCCCCAATATGGGATCCTTCTTGTTTCAAAGACAACTTATTTCCAAAGTTAAATAGAAAAGTTGAATCCACACAGACGGGTCGATCATGTAAGGAAAAAGGATCAAAATGTACAAGGCGAAAATCAAAGCTTCATTCTTTAAACAAGAAACAGACAGGGCCAGATCATTTGTCAAAAGAAAACAGTTCACTAAAAACCCCTGATTCTTCTGGTGTCCACTCACCAATGGATTTTTCTCCATATCAGGAAACAACAGCAAGTGGTCAAGATGTAAATGCTTCTAAAGGATTAGATGATCTGCATTCAACAATTCCTACTGATTATAAAGGAGAAAACTTGCCTACTACGGGGAGAGAAGATATGAGTACAACTGATAGAAGACATGGAGATCCGGATAATAATGAACGAGTTGAAAATTCATCTGTTGACAATTCTCATTCTTCTGGCCCTGAGATAGTCTGGCCTAATTTGAAAACTGAGCAATTCTGTGGTGGTAGTGCAGAAGGAGCTTCAGCTGGTGCTGGTGTCGACTTCACCTCAAACATTGAAAGGCAAAAGGATGATATTTTTCGTTTTGTTCCTGGTCTGAATGAATCTAAGGGGAAAAATTTTTCGTTTTCTGCATCTTCAACTGTGGTTGGTACTCCATCAGTAAAGCGTCAACAAAAGAAGAAATATAGGAGGAAATGGGGGTGCAACACTTCTGTTATCTCGCCTCATGTGAATGGAAAGTTTGTATCTTCTGTACAATTTTCACCACATAGCACTGCCAACATGTCATCAAATTCTGATGTGATGGATACATCTCAGATAAATGGCCAGTTCAAGGATGGGGATGTTGCATCATCAGAGGCAATTCCGTCATCAGCCTGTGACAAGTGGAGACTCAGGGGAAACCAGGCCTATAAAGATGGAGATCTTTCTAAAGCTGAGGGTTTCTACACAATAGGAATAAATTCTGTACCTTCAAGAGAAAGATCTGGAAGCTCGGTTCAGCCTCTTTTACTATGCTATAGTAATCGTGCTGCAACACGAATGAGTCTTGGAAGGATTAGAGAGGCTCTAGAAGACTGCATGATGGCTACAGTTCTGGACCCTTCCTTTCCGAAAGTGCAGATGAGAACTGCTAGCTGCCACCTTTTGCTAGGGGAAGTCGAAAATGCTCAGCAGTGTTTTAATAAGTGCATGGAATCAGGTAGTGTTGTTTGTTTGGATCGGAGGGCTATACTTGAAGCAGCTGAAGGTTTACAAAAGGCTCAGGAAGTTCTCAAGTGTATAAATAATGCTGCCGAACTTTTAAAAGAGAGGACTTCTGATGCAGCTGCTACAGCGTTGGAACTAGTTTCTAAGGCATTGTCTATAAGTTTATACTCAGAGAAATTGCTGCAAATGAAGGCAGAGGCTCTATGTTTGCTACGAAAGTATGAAGCAGCAATTCAGCTTTGTGAACAAAGTCAGCATCTTGCAGAGAAAAATTTTGTCTTGGCAAACAATGCTCCGGTTTCTGATAGTTCCTTGTGTGATAGTTACTCTAGTGTAAAATTGTGGAGGTGGTCAGTGATATCCAAGTGTTACTTTCGTTTGGGAAGGCTTGAGGCATCACTTAATGTTCTAGAGCAATTACAGCATCTTGTGTCTGTTACTGACAAGTGTGTGATTGATAATATTGAAGACTCATTATCATTAGCTTCTACAATAAGAGAACTTCTAGAACACAAGAGGGCAGGGAATGAAAACTTTAAAGTGGGAAAGTATACAGAAGCTATAGAGAATTACACTGCAGCTCTATCATGCAATATTAAATCATGTCCTTTTATGGCAATATGTTTCTGCAACCGTGCTGCTGCTCATCAAGCTTTGGGCCAAATTGCCGATGCCATTGCAGACTGTAGTGTGGCTATTGCCCTTGATGGAAATTATGCAAAGGCAATTTCAAGAAGAGCCACCTTACTTGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTTAAGAGACTTATAGTTGTTCTTGAAACTCAATCTAATGAAAGGGACAAACAGTCTGACTCACCCAGTGGATCGAAAGGTGTGAAAGAATCAAGGCAAGCTCGTCAACGTCTTCTTTCAGTGGAAGATCAAGCCAAAAAGGGGACACCCTTGGATGTTTACCTCATTTTAGGAATCAAATCAGCTGATACAGCAACAGATATCAAGAAGGCATACCACAAGGCAGCTCTCAGACATCATCCGGACAAGGCTGGTCAGTTGTTGGCAAGAAGTGAAGTTGGAGACGATGGCCAAGTTTGGAAGGAAATCTCACAGGAGGTGTACAAGGATGCTGATAAGCTTTTCAAAATGATTGGAGAAGCATATGCTGTGCTTTCAGACCCAGCCAAGCGGTCGGAGTATGATTTGGAAGAGGATATAAGGAAAGCTTGTAAGGTAAGTAACAGAGGTGGCACAAGCAGGAGATCTTCAGATGCTTATGGGGGGTTTGGAAGACCATGTGATGGTTACAAATCTCCCTCTGACAGAACTTCAAACAGACGAAATGGACGGGACCATTGGAAGACATATGGACATTCATATTCTCGATGGTAA 3768 0.4337 MSSSAALHFQSPIDSAEAPPHSSFLHFNADCLNPSVSAARTRSRPRLVKLRKQCASQQARSRNRAGADDGDAGFNPFRADQVNSNGSILESGFSNSRGDNGFVFGAGKVESDSSRDLNGGIRSGGVEFVFGAGKSDEGSIKNGESVAETVFGEGGKVGSNSEGELKSRVFVFGTSRDNLDSGLSTEKGKCSVGLGDSGAVKECKYEFECGQRDHFGGSYSGRESSVNLSDEMEKLNIKHSEGVDITGNSKNSHANGCAAGFVFGGNDIGFGYSSVSSKTEAGGQQFCAHAASGNVGVQNGTACGISSDSSGIHSKPSTSQEGVTDFQNGKNPGCYVSEDSKVNGAAASFSFSSFGIDSHPNYASMGHSSSADGDKGDNWFASTPEASKESFADFKPPIWDPSCFKDNLFPKLNRKVESTQTGRSCKEKGSKCTRRKSKLHSLNKKQTGPDHLSKENSSLKTPDSSGVHSPMDFSPYQETTASGQDVNASKGLDDLHSTIPTDYKGENLPTTGREDMSTTDRRHGDPDNNERVENSSVDNSHSSGPEIVWPNLKTEQFCGGSAEGASAGAGVDFTSNIERQKDDIFRFVPGLNESKGKNFSFSASSTVVGTPSVKRQQKKKYRRKWGCNTSVISPHVNGKFVSSVQFSPHSTANMSSNSDVMDTSQINGQFKDGDVASSEAIPSSACDKWRLRGNQAYKDGDLSKAEGFYTIGINSVPSRERSGSSVQPLLLCYSNRAATRMSLGRIREALEDCMMATVLDPSFPKVQMRTASCHLLLGEVENAQQCFNKCMESGSVVCLDRRAILEAAEGLQKAQEVLKCINNAAELLKERTSDAAATALELVSKALSISLYSEKLLQMKAEALCLLRKYEAAIQLCEQSQHLAEKNFVLANNAPVSDSSLCDSYSSVKLWRWSVISKCYFRLGRLEASLNVLEQLQHLVSVTDKCVIDNIEDSLSLASTIRELLEHKRAGNENFKVGKYTEAIENYTAALSCNIKSCPFMAICFCNRAAAHQALGQIADAIADCSVAIALDGNYAKAISRRATLLEMVRDYEQAACDLKRLIVVLETQSNERDKQSDSPSGSKGVKESRQARQRLLSVEDQAKKGTPLDVYLILGIKSADTATDIKKAYHKAALRHHPDKAGQLLARSEVGDDGQVWKEISQEVYKDADKLFKMIGEAYAVLSDPAKRSEYDLEEDIRKACKVSNRGGTSRRSSDAYGGFGRPCDGYKSPSDRTSNRRNGRDHWKTYGHSYSRW 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01683 1255 CDD DnaJ 1110 1185 IPR001623 -
Viun1g01683 1255 Gene3D Tetratricopeptide repeat domain 684 801 IPR011990 GO:0005515
Viun1g01683 1255 Gene3D Tetratricopeptide repeat domain 963 1084 IPR011990 GO:0005515
Viun1g01683 1255 ProSitePatterns Nt-dnaJ domain signature. 1173 1192 IPR018253 -
Viun1g01683 1255 MobiDBLite consensus disorder prediction 415 547 - -
Viun1g01683 1255 SMART tpr_5 686 719 IPR019734 GO:0005515
Viun1g01683 1255 SMART tpr_5 1036 1069 IPR019734 GO:0005515
Viun1g01683 1255 SMART tpr_5 854 887 IPR019734 GO:0005515
Viun1g01683 1255 SMART tpr_5 764 797 IPR019734 GO:0005515
Viun1g01683 1255 SMART tpr_5 1002 1035 IPR019734 GO:0005515
Viun1g01683 1255 SMART tpr_5 964 997 IPR019734 GO:0005515
Viun1g01683 1255 SMART tpr_5 730 763 IPR019734 GO:0005515
Viun1g01683 1255 MobiDBLite consensus disorder prediction 515 534 - -
Viun1g01683 1255 SUPERFAMILY Chaperone J-domain 1092 1192 IPR036869 -
Viun1g01683 1255 SUPERFAMILY TPR-like 687 887 IPR011990 GO:0005515
Viun1g01683 1255 SMART dnaj_3 1109 1188 IPR001623 -
Viun1g01683 1255 MobiDBLite consensus disorder prediction 42 78 - -
Viun1g01683 1255 Coils Coil 811 831 - -
Viun1g01683 1255 ProSiteProfiles dnaJ domain profile. 1110 1196 IPR001623 -
Viun1g01683 1255 PRINTS DnaJ domain signature 1112 1130 IPR001623 -
Viun1g01683 1255 PRINTS DnaJ domain signature 1130 1145 IPR001623 -
Viun1g01683 1255 PRINTS DnaJ domain signature 1168 1188 IPR001623 -
Viun1g01683 1255 SUPERFAMILY TPR-like 966 1063 IPR011990 GO:0005515
Viun1g01683 1255 Gene3D DnaJ domain 1096 1211 IPR036869 -
Viun1g01683 1255 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3 1255 - -
Viun1g01683 1255 Pfam DnaJ domain 1110 1193 IPR001623 -
Viun1g01683 1255 MobiDBLite consensus disorder prediction 452 487 - -
Viun1g01683 1255 MobiDBLite consensus disorder prediction 1205 1243 - -
Viun1g01683 1255 MobiDBLite consensus disorder prediction 1070 1091 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01683 Viun-Chr1 28571021 28579488 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01683 K09527 - gmx:100778106 1669.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01683 1 28571021 28579488 Viun1g01683 1 28571021 28579488 ECH