Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01676 ATGCTCTTCCAAACCACTCCTTCACCTTCTATGCCCTGCCTTCCAAACCAACACTCCACTCTCTCATCTTCTTTTCTTATACAAAGCAATTGTTTCATCAAAATAAAAACCATGGTGTCAAAACATGGTGGCTTCTATGAACAAGGGAGCTTTCCATCAAACAAAATCCTCATACTTTTACTCCTCAATTCTATACTTCACAAAGCCAACTCAGGCTGCAATAACAACTCTTGTTCAAATTCCTTAGTTCCATTTCCTCCTCATGAGATTCTCTCATCATTGCAAACACTGCCTCTAGATGGCTACTTTAGCCTAAGTAACAATGAGGATGCTGCCAAGGACTTTGGCAACATACACCATTTTCCTCCTCTGGCAGTGCTGCATCCAAAAACAGTTTCTGATATATCAAACACCATAAAGCATGTTTTTGAAATGGGGTTTGCCTCACAGCTGAAGGTTGCTGCTAGAGGCCATGGCCATTCCCTGCAAGGCCAGGCACAAGCCAATGGGGGCCTAGTCATTAACATGGAGTCACTGCAGGGTCCTGAAATGAAAGTTCACATTGGAGACTTCCCTTATGTGGATGTCTCAGGTGGAGAGTTGTGGATAAACATTCTGCATGAAACTCTTAAACATGGGTTGGCACCAAAGTCATGGACAGATTACCTTCACCTCACTGTTGGAGGCACTCTTTCAAATGCTGGTATAAGCGGCCAAGCCTTCAAACATGGACCTCAGATCAATAACATCTTTCAGCTTGAAGTGATCACAGGAAAAGGAGAGGTGGTTACCTGCTCAGGGAACCGAAATGCTGACCTTTTTCATGGTGTACTTGGAGGGCTTGGTCAATTCGGTATCATCACAAGGGCTAGAATTTCTCTTGAAACAGCACCAAAAATGGTGAAATGGATTAGAGTGCTCTACTCAGAATTCTCAATATTTACTAGGGATCAAGAGCATTTAATATCACTTAAAAACACATTTGATTATATTGAAGGGTTTGTGATCATAAACAAAACTGGCATCCTTAACAATTGGAGATCATCCTTTGACCCCAAAAATCCACTTCAAGCTAGCCAATTCAATTCTGATGGAAGAACCTTTTACTGTCTTGAGATGGCAAAATACTTCAACCCTGATGAAGCAGAACTCATGAATCAGAGTATTGATCACCTACTATCAAAGTTGAGTTACATCCAACCAACTCTCTTCCGATCAGAAGTTTCTTACGTAGAATTCCTAGACAGAGTGCATGTTTCTGAGAAAAACCTAAGAGCAAAAGGTTTGTGGGAAGTCCCCCACCCCTGGCTGAACCTTCTGATCCCAAGAAGTGAGATTCATGACTTTGCTGAAGAAGTATTCGGCAAAATTCTTAAGGACACAAGTAATGGCCCCATACTCATTTACCCTGTCAACCAAACAAGATGGAACAGTAAGACATCTTTGGTTACACCAGAGGAAGATGTTTTTTACCTGGTGGCTTTTCTATCCTCAGCAGTCCCAAATTCTACTGGTGCAAACAGTTTAGAACAGATTGTAGCCCAAAACAAAAGGATCATAGAATTCTACACCAGTGCAGAGCTGAAAGTGAAGCAATACCTTCCCCATTACAGCACAGAGGAAGAATGGAAAGCCCACTTTGGGTCACAATGGGAGGCATTCGTGGAAAGAAAAAAGGCCTATGACCCACTAGCACTGCTTGCCCCTGGCCACAGAATCTTTCAAAAGGCAGTGTCTGCTTCATGCTAG 1749 0.4248 MLFQTTPSPSMPCLPNQHSTLSSSFLIQSNCFIKIKTMVSKHGGFYEQGSFPSNKILILLLLNSILHKANSGCNNNSCSNSLVPFPPHEILSSLQTLPLDGYFSLSNNEDAAKDFGNIHHFPPLAVLHPKTVSDISNTIKHVFEMGFASQLKVAARGHGHSLQGQAQANGGLVINMESLQGPEMKVHIGDFPYVDVSGGELWINILHETLKHGLAPKSWTDYLHLTVGGTLSNAGISGQAFKHGPQINNIFQLEVITGKGEVVTCSGNRNADLFHGVLGGLGQFGIITRARISLETAPKMVKWIRVLYSEFSIFTRDQEHLISLKNTFDYIEGFVIINKTGILNNWRSSFDPKNPLQASQFNSDGRTFYCLEMAKYFNPDEAELMNQSIDHLLSKLSYIQPTLFRSEVSYVEFLDRVHVSEKNLRAKGLWEVPHPWLNLLIPRSEIHDFAEEVFGKILKDTSNGPILIYPVNQTRWNSKTSLVTPEEDVFYLVAFLSSAVPNSTGANSLEQIVAQNKRIIEFYTSAELKVKQYLPHYSTEEEWKAHFGSQWEAFVERKKAYDPLALLAPGHRIFQKAVSASC 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01676 582 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 123 158 IPR006093 GO:0016491
Viun1g01676 582 Pfam FAD binding domain 123 266 IPR006094 GO:0050660
Viun1g01676 582 Gene3D - 108 574 IPR016167 -
Viun1g01676 582 FunFam Cytokinin dehydrogenase 2 300 533 - -
Viun1g01676 582 FunFam Cytokinin dehydrogenase 1 176 299 - -
Viun1g01676 582 SUPERFAMILY FAD-binding/transporter-associated domain-like 107 294 IPR036318 GO:0050660
Viun1g01676 582 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 298 574 IPR015345 GO:0009690|GO:0019139|GO:0050660
Viun1g01676 582 Gene3D - 300 533 IPR016170 -
Viun1g01676 582 SUPERFAMILY FAD-linked oxidases, C-terminal domain 298 574 IPR016164 GO:0003824|GO:0050660
Viun1g01676 582 Gene3D - 176 299 IPR016169 -
Viun1g01676 582 PANTHER GULONOLACTONE OXIDASE 84 575 - -
Viun1g01676 582 ProSiteProfiles PCMH-type FAD-binding domain profile. 119 297 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01676 Viun-Chr1 28555666 28559141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01676 K00279 - gmx:100777568 966.837