Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01644 ATGAGGCTTCAACCGCACTTCGCGGTGGCCGTGGCGGCGTTTGTGGCGACCGCTTGGGCGGTGCACATGCACAGCGGCGTTTGGAAGTCGGGGGAAGACGTGGAAGGCATGCAGGATTGGCAGTACGAAGGTGTTCCGATTGACGGCGGCGTTGGACCGGAGAGTTTCGCCTTCGATCCCCGCGGCGAAGGGCCTTACACGGGCATTTCCGACGGTCGAATCATCAAATGGCAGCGCTCCGAGAATCGTTGGCTCAACTTTTCCGTTACTTCCTTGCAAAGGAATGAAGAGTGTGGAGGAGCATACGAGGAGCATCCGAAGAAAGAGCACGTGTGTGGGCGACCACTTGGGTTGTGCTTTAGCAAGCTATCCAATGAACTTTACATTGCAGATGCTTACAATGGATTAGTTGTTGTTGGCCCCAATGGTGGCACTCCATCACGACTCATATCAACTCTACAAGAAGAAGATGAGGAAGATGAACCCTTGGCTTTCACAAATGGTTTGGATGTTGATCAACGGACTGGAGCAGTCTACTTCACCACCAGTAGTTCTAAATATCAAAGGAGGAATTACATCTCTTTGATCTTGAGCAAAGATAAATCGGGGAAGCTAATGAAATATGAACCAGAAAGTGAACGACTTAGCATTATTCTAAACAATCTCTCGTTTGCAAATGGTGTAGCATTAAGCAAAGATAGTGACTACATTCTAATAATAGAGACAACAACATGCAGAGTATTAAGGTATTGGCTAGAAACACCAAAAGCTGGAACATTGGAAGTGTTTGCTCAAGTACCAGGTTTCCCAGACAACATCAAACGAAGTCCAAGAGGGGGGTTTTGGGTGGGAATTTACTCGAGAAGAGAAAAATTTATCCAATGGATTTTATCATATCCATGGATTGGAAAAGTTTTGCTTGCACTTCCTTTGGACATTACAAAAGCTTATTCATATTTGGCTAAGCTTAAAAGAAGTAGTGGAATGGCAATTAGGCTAAGTGAGGATGGAGATATATTAGAAGTTGTTGAAGACAAAAAATGGAACAAAGGGAGGTCTATTAGTGAAGTGGAGGAAAAAGATGGAATATTATGGGTTGGATCCATTGATGCACCTTTTGTTGCTAAGTATAATATTCATATGACAAAAGAACAAGTAAAAGGGATTTGA 1170 0.4402 MRLQPHFAVAVAAFVATAWAVHMHSGVWKSGEDVEGMQDWQYEGVPIDGGVGPESFAFDPRGEGPYTGISDGRIIKWQRSENRWLNFSVTSLQRNEECGGAYEEHPKKEHVCGRPLGLCFSKLSNELYIADAYNGLVVVGPNGGTPSRLISTLQEEDEEDEPLAFTNGLDVDQRTGAVYFTTSSSKYQRRNYISLILSKDKSGKLMKYEPESERLSIILNNLSFANGVALSKDSDYILIIETTTCRVLRYWLETPKAGTLEVFAQVPGFPDNIKRSPRGGFWVGIYSRREKFIQWILSYPWIGKVLLALPLDITKAYSYLAKLKRSSGMAIRLSEDGDILEVVEDKKWNKGRSISEVEEKDGILWVGSIDAPFVAKYNIHMTKEQVKGI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01644 389 Pfam Strictosidine synthase 167 254 IPR018119 GO:0009058|GO:0016844
Viun1g01644 389 Pfam Strictosidine synthase-like, N-terminal 45 77 - -
Viun1g01644 389 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 40 380 - -
Viun1g01644 389 SUPERFAMILY Calcium-dependent phosphotriesterase 20 379 - -
Viun1g01644 389 PANTHER STRICTOSIDINE SYNTHASE-RELATED 39 370 - -
Viun1g01644 389 Gene3D - 45 387 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01644 Viun-Chr1 28159784 28163437 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01644 - - gmx:100789150 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01644 1 28159784 28163437 Viun1g01644 1 28159784 28163437 ECH