Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01643 ATGAACCCAGGGCTCCTTGCAGCTGCAACCTTGCTTGCACTCTTAGCCATCACCTTCTCCTTCTTCAACCCTCAAGCCCTGTTTTCTCCGCCCCATCTTCCGGGATCCAAGGATCACCTCCACGCAGCGCGGATACTCCATGTCGCCGGCGCCGTCGGCCCTGAAAGTCTGGTTTTTGACGCTCACGGCGGAGGGCCCTACACCGGCGTCGCCGACGGCCGGATTTTGAAGTGGGAAGGCGAGCAGCAGGGGTGGACTGATTTTGCTTTCACCAGTTCCAATAGGTCGAATTGTGTTCGTCCATTTGCACCAGAGTTGGAGCATGTTTGTGGGAGGCCTTTAGGACTAAAATTTGATAAGAAAACTGGAGATCTGTACATTGCTGATGCGTACCTAGGCCTAAAAGTGGTGGGATCTGAAGGGGGTTTGGCCTCTGAAGTGGTAACAGAAGTTGAAGGCCAGCCCTTGCATTTCACTAATGACATGGATATCAGTGAAGATGAAGATGTGATTTACTTCACTGACTCAAGCACAATCTTCCGGAGAAGGCAATTTATGCTTGTACTCCTTAGTGGAGACAGGAGCGGTAGGTTAATGAAATATGACAAGTCAACAAAGGAAGTGAAGGTTTTATTACGTGACATTGCTTTTCCTAATGGTGTTGCTTTAAGCAAAGATGGATCATTTGTTCTGGTGGCAGAAACCACTACTTGCAAGATCCTGCAACTATGGCTTCGTGGACCCAAAGCTGGTGAAGTGGATACTTTTGTGGAACTACCCGGTTTTCCAGACAATATCAGAAGAAATTCAGAAGGGCATTTCTGGGTAGCTCTGCATGCAAAGGGAAGCCCTTTTGCGAAGTGGGTTTCCTCCAATCCATGGGCGGGAAAAGCGATGCTGAAGATTGGGTTTAACTTCAAACAGTTGCACTCATCAGTTGCAGGGTGGAAGCCTCATGCTGCTGCTGTAAAACTAAGTGACAGAGGAGAGATACTGGAAGTGTTGGAAGATTGTGAGGGGAAGACCTTAAAGTTCATCAGTGAAGTTGAAGAGAAAGATGGGAAGCTTTGGATTGCGTCTGTGTTGATGCCTTTCATTGGAGTTTATAGTTTGTGA 1116 0.4794 MNPGLLAAATLLALLAITFSFFNPQALFSPPHLPGSKDHLHAARILHVAGAVGPESLVFDAHGGGPYTGVADGRILKWEGEQQGWTDFAFTSSNRSNCVRPFAPELEHVCGRPLGLKFDKKTGDLYIADAYLGLKVVGSEGGLASEVVTEVEGQPLHFTNDMDISEDEDVIYFTDSSTIFRRRQFMLVLLSGDRSGRLMKYDKSTKEVKVLLRDIAFPNGVALSKDGSFVLVAETTTCKILQLWLRGPKAGEVDTFVELPGFPDNIRRNSEGHFWVALHAKGSPFAKWVSSNPWAGKAMLKIGFNFKQLHSSVAGWKPHAAAVKLSDRGEILEVLEDCEGKTLKFISEVEEKDGKLWIASVLMPFIGVYSL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01643 371 Gene3D - 37 371 IPR011042 -
Viun1g01643 371 Pfam Strictosidine synthase-like, N-terminal 38 78 - -
Viun1g01643 371 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 38 371 - -
Viun1g01643 371 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Viun1g01643 371 PANTHER STRICTOSIDINE SYNTHASE-RELATED 11 364 - -
Viun1g01643 371 SUPERFAMILY Calcium-dependent phosphotriesterase 24 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01643 Viun-Chr1 28151865 28153777 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01643 - - gmx:100815025 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01643 1 28151865 28153777 Viun1g01643 1 28151865 28153777 ECH