Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01624 ATGATTGCTATGGATACTTTGCTCAAAACACCAAACAAGCTTGAGTTTTTGCACCCACTTCACGGTTATTCAGAGAAATTAAGCGGTTCGGGCTCCTCTAGGGTGCAAAATCAAGATTTTAGGTTTGGTTCTAAGAAACCACTTGTGAGATGGGGTAAATGTGGTGGTTTGCGTGCTAGTAGCAGTGCCCTTTTGGAACTTGTTCCTGAATTCAAGAAGGAGAATCTGGATTTTGAACTTCCTTTGTATGATTCCTCAAAGGGGGCTGTGGTGGACCTTGCTGTTGTGGGAGGGGGACCTGCTGGACTTGCAGTTGCGCAGCAGGTTTCTGAGGCAGGGCTTTCAGTTTGTGCTATTGATCCAAACCCTAGGTTGATTTGGCCCAATAATTATGGGGTTTGGGTGGATGAGTTTGAAGCCATGGATTTGCTCGACTGCCTTGACACCACCTGGTCCGGAGCAGTTGTCTACATCGACGAAAAAACGAAGAAGGATCTCGATAGGCCTTATGGTAGGGTCAATAGGAAGCTGCTGAAGTCGAAGATGCTGCAGAAATGTATCTCAAATGGTGTCAAGTTTCACCAGGCCAAAGTTATCAAGATTATTCACGAGGATACCAAATCTTTGCTGATTTGTAATGATGGTGTCACTGTTCAGGCTACTGTGGTTCTTGATGCAACTGGGTTTTCAAGATGCTTGGTTCAGTATGATAAACCGTATAACCCGGGTTACCAAGTGGCTTATGGGATTCTGGCTGAGGTTGATGAACACCCGTATGATGTAGATAAAATGCTTTTTATGGATTGGAGAGATTCTCATCTGGACAATGACAAGGAGCTGAAGCAGAGAAATGGTAGAATACCTACTTTCCTGTATGCAATGCCCTTTTCATCCACTAAGATATTTCTTGAAGAAACCTCTCTTGTAGCACGGCCTGGATTACGAATGGATGATATACAGGAAAGAATGGTTGCAAGGTTGAGACATTTGGGTATCAGAGTGAAAAGTATTGAAGAAGATGAGCACTGTGTGATTCCCATGGGTGGCCCCCTCCCAGTTCTTCCCCAAAGGGTTGTTGGCATTGGTGGCACCGCTGGGATGGTGCATCCTTCAACTGGGTACATGGTTGCAAGGACCCTGGCTGCAGCTCCTATTGTTGCTAATGCTATTGTTCAGAGCCTGGGCTCTGATAGAGGTCTTTCTGGAGGAGATATATCTGCACAAGTGTGGAAAGATTTATGGCCAATCCAAAGGCGGCGACAAAGGGAGTTCTTCTGTTTTGGTATGGACATCTTACTCAAACTTGATTTACCTGCCACAAGGAGATTTTTTGATGCGTTTTTTGATCTGGAACCGCATTACTGGCATGGATTCTTGTCATCAAGACTGTTTCTTCCTGAGCTCTTATTTTTTGGACTCTCTCTATTTTCTTATGCTTCTAATACATCTAGGATAGAGATTATGGCGAAGGGAACTCTTCCTTTGGTAAACATGATCAACAACTTGGTAAAAGATACAGAATAG 1524 0.4416 MIAMDTLLKTPNKLEFLHPLHGYSEKLSGSGSSRVQNQDFRFGSKKPLVRWGKCGGLRASSSALLELVPEFKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDEKTKKDLDRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKIIHEDTKSLLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPYDVDKMLFMDWRDSHLDNDKELKQRNGRIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQERMVARLRHLGIRVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQSLGSDRGLSGGDISAQVWKDLWPIQRRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPHYWHGFLSSRLFLPELLFFGLSLFSYASNTSRIEIMAKGTLPLVNMINNLVKDTE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01624 507 PANTHER - 59 502 - -
Viun1g01624 507 FunFam lycopene epsilon cyclase, chloroplastic 88 426 - -
Viun1g01624 507 SUPERFAMILY FAD/NAD(P)-binding domain 91 474 IPR036188 -
Viun1g01624 507 NCBIfam lycopene cyclase family protein 92 487 IPR010108 GO:0016117|GO:0016705
Viun1g01624 507 Gene3D - 89 445 IPR036188 -
Viun1g01624 507 Pfam Lycopene cyclase protein 92 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01624 Viun-Chr1 28032597 28034586 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01624 K06443 - gmx:100810895 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01624 1 28032597 28034586 Viun1g01624 1 28032597 28034586 ECH