Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01616 ATGGACACCGCCATGCGCACCACCAGCGTGCAACAACGCGCCCCCACAAAGAAAACCAAACCCAAGAAGAGGAACAACCCACACCCTGTCAAAGTGGTGTACATATCCAACCCCATGAAAATCAAAACCAGCGCCTCCGAGTTTCGTGCCCTCGTGCAAGAACTCACCGGCCAAGACGCCCAGTCGCCGCCTAACCCCACACGCTTCCACGCGCTCGATTCCTCCGATGATTCCTCTTCTGACAAGGTCACCAATGTTGACGACCATGTCATCCCTCTCCCTACGGATCCCAACAATTCCGTACAACACCACCAGCAACACCAGCCGCAACCCTCTTCTTCCTTCGAGGCTCCGGACGACGACGTTTTCACTCCCCAGATGATAGAGAGCATTTCCTCCCTGCTTCCTGCAACTCTATTCTATGAATCTCCCCATCTTAATTACTGGTGA 450 0.54 MDTAMRTTSVQQRAPTKKTKPKKRNNPHPVKVVYISNPMKIKTSASEFRALVQELTGQDAQSPPNPTRFHALDSSDDSSSDKVTNVDDHVIPLPTDPNNSVQHHQQHQPQPSSSFEAPDDDVFTPQMIESISSLLPATLFYESPHLNYW 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01616 149 MobiDBLite consensus disorder prediction 1 15 - -
Viun1g01616 149 MobiDBLite consensus disorder prediction 1 33 - -
Viun1g01616 149 MobiDBLite consensus disorder prediction 95 119 - -
Viun1g01616 149 Pfam VQ motif 35 61 IPR008889 -
Viun1g01616 149 MobiDBLite consensus disorder prediction 52 121 - -
Viun1g01616 149 MobiDBLite consensus disorder prediction 52 73 - -
Viun1g01616 149 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 1 146 IPR039335 GO:0051091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01616 Viun-Chr1 27872921 27873840 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01616 - - gmx:102661022 177.948