Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01610 ATGGCAATTCTCAAGATTACCAAAAAGCACCATAAGCATTTCAACAACCCTTTCCCTTCTTCAGTTTCAACCACCATCCCTTACGTTCAAGGTTCTCTCTTCTTCAATTCGAAAAGAGTTCCTTCGGATCAGACCTTCTCAATTGGCAGTAATTTTCAGCTTTCTTGGACCTCCGACAATGGAGGGCACCTCTCAATCTCGCACCTTTCTCAACAAACCAGGCCAATTTGGTCTACTATCCCTGGACAGGCTTTTGTCTCGGCTGCACTGGTTGACACAGAATTCGAAGAAAGTAGAGGATCCTTTCTTGTCAAGGACAAAGATGTTCATATGGTTTGCAATCACCAAACCATTGAGGATATTAGGATCATTGAGGATATTGGGGTGATCAATGGTCAATTTGATCATCATTTGGAATGTGTAGTGCCAGATTCTCCTTCTGTGCATCGAAGGTTGGAAAAGAAAACTGATGCTCAAGAGATTCAGCTTCCTACTTTGATGATCACAGGAAGGCTTTTCAATATGACTAAGAAGAGTAAAAGGTTTCAAAAGCATGGCATTCAAGCAACTATGCAGTTTGAGGCAAAAGGAGCTTCTGTGCATGCAAGGTATTGGGTTTTGTTCAATCAGAAAACCAACCATGAGGTTGGGTTTCAAGTGAAGATTGAGAAACCTAACTTCACCTCCCGCAACCAAGTCTCTAAAACAGTTTCAGGAGGGTACCAGGGCTTCAAGAGGGGGCGGAATAATAGGAAAAAGAGACTGGGTTGGTTTTGGTACCTTTCTAGGCCAAGAGGGTTTGTGCTAGTCTCTTCAGTGGAGGAAGAGATAGGAAACTTGGATATCCTAAAACCAGAAGAGTTCAATAGAGTGTGGTTGACATATGCCACTGATGAGAATGAGAGGTTTTATGGCTTTGGGGAGCAATTTTCTCACATGAACTTCAAAGGCAAAAGGGTGCCCATATTTGTTCAAGAACAAGGTATTGGCAGAGGAGATCAACCCATAACCCTAGCTGCTAACTTGATTAGTTACAGGGCAGGAGGTGATTGGAGTACAACTTATGCTCCTTCTCCATTCTACATAACGTCAAGAATGAGGTCTGTCTGCCTTGAAGGATATGATTATACTGTTTTCGATCTTACTAAACTTGACAGGGTACAGATACAGATACATGGAAACTCAGTTGAAGGGCGCATATTGCATGGAAACTCACCTTGTGAACTGATTGAACGTTTCACAGAAAGCATTGGAAGGCTACCTGAGCTTCCACAATGGATTATATCTGGTGCTATAGTTGGAATGCAAGGTGGCACTGATGCTGTACGTCATATCTGGGATGAACTAAGGACCTATGATGTTCCTATCTCGGCATTTTGGTTGCAGGATTGGGTGGGCCAGAGAAAAACATTGATTGGTTCACAGCTCTGGTGGAATTGGGAAGTGGATTCACAAAGGTATTGGGGATGGAAGGAACTTATTGAAGATCTTAGGTCTCAGGATATAAAGGTTATGACATATTGCAATCCCTGTCTAGCTCCGGTTGATGAGAAACAAAACAAAAGGAGAAACCTCTTTGAGGAGGCAAAACAGTTGGACATATTGGTAAAAGACAGCAATGGAAATCCATATATGGTTCCAAACACGGCTTTTGATGTAGGAATGCTAGATCTAACGCACCCTAAAACTGCAACTTGGTTCAAGCAGATTCTTGGAGACATGGTGGATGATGGAGTTAGAGGATGGATGGCTGATTTTGGTGAGGGCCTTCCTGTTGATGCTGTTCTATATTCAGGTGAAGATCCTATTTCAGCTCATAACAGATACCCGGAACTATGGGCCAAAATTAACAGAGAGATTGTGGAAGAATGGAAAAGTAACTCCTTGGAGAAGGTAAAGAAAGAACAAGAAGAAGGTTTGGTTTTCTTCATGAGAGCTGGTTTTAGAGATAGCCCCAAGTGGGGGATGCTATTTTGGGAAGGAGACCAAATGGTCAGTTGGCAAAGAAATGATGGAATAAAAAGTTCTGTTGTTGGCCTTCTGAGCAGTGGAATTTCTGGCTATGCCTTTAATCACAGTGACATTGGTGGATATTGTACAGTAAACTTACCTATAGTCAAATATAATAGAAGTGAAGAATTGCTTTTGCGGTGGATGGAGCTAAATTCCTTCACCATAGTCTTCCGTACCCATGAAGGAAACAAACCATCCTGCAACAGCCAGTTTTACTCAAACCAGCAGACAATGTCACACTTTGCACGTTTTGCAAAAGTATACAAAGCATGGACATTTTATCGAATTCAGCTGGTGAAGGAAGCTGCCCAGAAAGGATTGCCTGTATGCCGCCATCTGTTTGTTCATTATCCAACTGATGAACGCGTGCACCATTTGAGTTATCAGCAGTTCTTGGTTGGTTCTGAGTTCCTAGTGGTTCCTGTCCTTGACAAAGGAAAGAAAAAAGTTAAAGCTTATTTTCCATTGGGGGAGAGTAGTAGTTGGGTTCATATATGGACAGGAAAAGTGTTTTCCAAACAAGGAACTGAAGAATGGGTAGAAGCTCCAATAGGATATCCTGCTGTGTTTGTTAAGGTTGGCTCTCATATTGGAGAAACGTTTTTGAATAACCTAAGAAGTTTAGGCATTCTTTAA 2649 0.4198 MAILKITKKHHKHFNNPFPSSVSTTIPYVQGSLFFNSKRVPSDQTFSIGSNFQLSWTSDNGGHLSISHLSQQTRPIWSTIPGQAFVSAALVDTEFEESRGSFLVKDKDVHMVCNHQTIEDIRIIEDIGVINGQFDHHLECVVPDSPSVHRRLEKKTDAQEIQLPTLMITGRLFNMTKKSKRFQKHGIQATMQFEAKGASVHARYWVLFNQKTNHEVGFQVKIEKPNFTSRNQVSKTVSGGYQGFKRGRNNRKKRLGWFWYLSRPRGFVLVSSVEEEIGNLDILKPEEFNRVWLTYATDENERFYGFGEQFSHMNFKGKRVPIFVQEQGIGRGDQPITLAANLISYRAGGDWSTTYAPSPFYITSRMRSVCLEGYDYTVFDLTKLDRVQIQIHGNSVEGRILHGNSPCELIERFTESIGRLPELPQWIISGAIVGMQGGTDAVRHIWDELRTYDVPISAFWLQDWVGQRKTLIGSQLWWNWEVDSQRYWGWKELIEDLRSQDIKVMTYCNPCLAPVDEKQNKRRNLFEEAKQLDILVKDSNGNPYMVPNTAFDVGMLDLTHPKTATWFKQILGDMVDDGVRGWMADFGEGLPVDAVLYSGEDPISAHNRYPELWAKINREIVEEWKSNSLEKVKKEQEEGLVFFMRAGFRDSPKWGMLFWEGDQMVSWQRNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYNRSEELLLRWMELNSFTIVFRTHEGNKPSCNSQFYSNQQTMSHFARFAKVYKAWTFYRIQLVKEAAQKGLPVCRHLFVHYPTDERVHHLSYQQFLVGSEFLVVPVLDKGKKKVKAYFPLGESSSWVHIWTGKVFSKQGTEEWVEAPIGYPAVFVKVGSHIGETFLNNLRSLGIL 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01610 882 CDD GH31_N 288 418 - -
Viun1g01610 882 SUPERFAMILY Glycosyl hydrolase domain 779 863 - -
Viun1g01610 882 Coils Coil 515 535 - -
Viun1g01610 882 SUPERFAMILY Galactose mutarotase-like 286 406 IPR011013 GO:0003824|GO:0005975|GO:0030246
Viun1g01610 882 CDD GH31_glucosidase_YihQ 418 756 IPR044112 -
Viun1g01610 882 Gene3D glycosyl hydrolase (family 31) 252 402 - -
Viun1g01610 882 Pfam Glycosyl hydrolases family 31 401 866 IPR000322 GO:0004553|GO:0005975
Viun1g01610 882 SUPERFAMILY (Trans)glycosidases 409 777 IPR017853 -
Viun1g01610 882 Gene3D - 811 863 IPR013780 -
Viun1g01610 882 Gene3D Glycosidases 405 810 - -
Viun1g01610 882 PANTHER SULFOQUINOVOSIDASE 1 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01610 Viun-Chr1 27762961 27767609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01610 293 854 Glycoside Hydrolase AT3G45940 23.077 1.24e-21 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01610 - - var:108329550 1749.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01610 1 27762961 27767609 Viun1g01610 1 27762961 27767609 ECH