Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01601 ATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCTGTCACAAGGCTTTTCATCGTGGCTTCGGCTATTTTCACAATCTTCTTTGGGATCCAAGGCCGTTTCGGCACTCTGGGGTTGTCTTATCAGGATATTTTTGGAAAACTTCGCCTTTGGAAGTTGATCATGTCCATATTTTCCTTCTCATCAACGCCAGAGTTGATGTTTGGACTGTATCTGCTATATTATTTCAGGGTCTTTGAAAGACAAATAGGCTCCAATAAATACTCAGTCTTTATCGTGTTCTCAATATTAACTTCACTACTCCTTGAGGTCTTTGCTGTAGCACTTTTAAAAGATCCTACAGCAAATCTAGTCACTCCTGGACCATATGGCCTTATATTTGCTTCATTTGTACCCTTTTTCTTTGACATTCCGGTTTCAACACGGTTTCGTGTGTTTAGCTTCTTCTTCTCAGACAAGTCATTCATATATCTAGCTGGTATTCAGCTTCTTTTGTCATCATGGAAAAGGTCCATCTTACCAGGAATGTGTGGCATCCTTGCTGGTTCCTTGTACCGTTTGAATGTCTTTTACATCCGCAAAGCAAAGTTCCCAGAGTTTATCTCGTCATTCTTCTCACGAATTACATTGCCATCTATGGGAAGTACACATGCAACATCATCATCAACAAGGCATAGTGTTGGGAATTTACCTTCCCATCCAGCTCGCCAAATGGAGAGAAACTACCCTCCTCCAATGCAATCTGTAGAACCATCGGAGGACTCGATCACTACACTTGTCTCGATGGGCTTTGACAGAAATTCTGCGAGACAAGCTCTAGTGCAGGCCAGAAATGATGTGAATGTGGCCACCAACATTCTATTGGAGGCACAGTCCCACTAA 882 0.4263 MNGGPSGFTNAPVTRLFIVASAIFTIFFGIQGRFGTLGLSYQDIFGKLRLWKLIMSIFSFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFIVFSILTSLLLEVFAVALLKDPTANLVTPGPYGLIFASFVPFFFDIPVSTRFRVFSFFFSDKSFIYLAGIQLLLSSWKRSILPGMCGILAGSLYRLNVFYIRKAKFPEFISSFFSRITLPSMGSTHATSSSTRHSVGNLPSHPARQMERNYPPPMQSVEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01601 293 SUPERFAMILY UBA-like 243 290 IPR009060 GO:0005515
Viun1g01601 293 PANTHER RHOMBOID-RELATED PROTEIN 3 237 - -
Viun1g01601 293 Gene3D - 216 292 - -
Viun1g01601 293 MobiDBLite consensus disorder prediction 216 230 - -
Viun1g01601 293 SUPERFAMILY Rhomboid-like 11 187 IPR035952 -
Viun1g01601 293 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 250 290 IPR015940 -
Viun1g01601 293 MobiDBLite consensus disorder prediction 216 250 - -
Viun1g01601 293 Gene3D - 9 188 IPR035952 -
Viun1g01601 293 SMART uba_6 252 289 IPR015940 -
Viun1g01601 293 Pfam UBA/TS-N domain 252 287 IPR015940 -
Viun1g01601 293 Pfam Rhomboid family 49 189 IPR022764 GO:0004252|GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01601 K25216 - gmx:100805217 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01601 1 27687414 27695394 Viun1g01601 1 27687414 27695394 ECH