Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01590 ATGAATCTCTTCATGTTCGGTAATTTTTTATGGGAAATCACAAACACAAGAGAAGTCAGGAATGAATTTGGCAAATATCATATAAAAGATTTATCTCAATGCCTCAACTGGACTTCAAGTCCAAATTACTGTAGTCATGGCTATGTGGTAAATCGTCATTTTGCATCTGAACGCAATGATATATGTACAAAGGGGTTCTCAAGTAAGCTTCTTAAAACTATTCCATACCATGTAAAGATTGTGGAGGTTGGCGCAAGGGATGGATTGCAAAACGAGAAGGCTATTATTCCTACTAATATAAAAGTTGAGTTAATAGAACTACTGGTTTCTTCTGGGTTGTCTGTTGTTGAGGCAACAAGTTTTGTCTCACCAAAATGGGTACCCCAGTTGGCAGATGCAAAGGATGTGTTGGCAGCAATTCAAAATGTTGAAGGTGCTAGGTTTCCTGTCTTGACTCCAAACCTTAAAGGTTTTGAGGCAGCTGTTGCTGCTGGAGCTAAAGAAGTGGCTGTTTTTCCTGCAGCTTCTGAATCATTCTCAAAAGCAAATCTAAATTGTGGCATTGAAGATAATCTTGCTCGTTGCCGTGATATTGCTTCAGCTGCTGGAAGTCTCTCGATCCCAGTTCGCGGATATATATCATGTGTTGTGGGATGTCCCCTGGAAGGAAGTATTGCCCCAGAGAAAGTAGCATATGTGGCAAAATCACTGTATGAGATGGGTTGCGCAGAGATTTCACTGGGTGATACAATTGGTGTTGGCACACCGGGTACCGTAATTCCGATGCTTGAAGCTGTTTTTGACGTTGTTCCAACTGACATGCTTGCTGTCCATTTTCACGATACTTACGGTCAGGCACTTTCAAATATTTTAATTTCACTTCAGATGGGTATCAGCACAGTGGATTCATCTGTTGCTGGTCTTGGAGGTTGTCCATATGCAAAGGGTGCAACTGGGAATGTAGCCACTGAGGATGTCGTTTACATGCTGAATGGACTTGGAGTGAAAACAAATGTGGACCTTGGAAAGCTTATGCTAGCCGGGGATTTCATTTGCAAGCATTTAGGACGTGCATCTGGTTCCAAAGCAGCTACTGCTTTGAGTAAAGTTACTAGTCATGCCTCCAAACTATGA 1134 0.4189 MNLFMFGNFLWEITNTREVRNEFGKYHIKDLSQCLNWTSSPNYCSHGYVVNRHFASERNDICTKGFSSKLLKTIPYHVKIVEVGARDGLQNEKAIIPTNIKVELIELLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEDNLARCRDIASAAGSLSIPVRGYISCVVGCPLEGSIAPEKVAYVAKSLYEMGCAEISLGDTIGVGTPGTVIPMLEAVFDVVPTDMLAVHFHDTYGQALSNILISLQMGISTVDSSVAGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICKHLGRASGSKAATALSKVTSHASKL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01590 377 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 60 371 IPR043594 GO:0016833
Viun1g01590 377 SUPERFAMILY Aldolase 73 371 - -
Viun1g01590 377 ProSiteProfiles Pyruvate carboxyltransferase domain. 78 345 IPR000891 GO:0003824
Viun1g01590 377 FunFam Hydroxymethylglutaryl-CoA lyase, mitochondrial 72 370 - -
Viun1g01590 377 CDD DRE_TIM_HMGL 80 353 - -
Viun1g01590 377 Gene3D Aldolase class I 72 370 IPR013785 -
Viun1g01590 377 Pfam HMGL-like 78 350 IPR000891 GO:0003824
Viun1g01590 377 ProSitePatterns Hydroxymethylglutaryl-coenzyme A lyase active site. 304 313 IPR000138 GO:0004419
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01590 Viun-Chr1 27556775 27564857 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01590 K01640 - gmx:100801507 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01590 1 27556775 27564857 Viun1g01590 1 27556775 27564857 ECH