Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g03064 ATGGCGAAATCGGGATCAACCGCTGTCTCTGCCTCTGCAAAGGTTTACCCCTCCAACGATCCCGACCCAGACTCTTACGCCCTCGAGAAGTTCAGACTCTACGAAACCAGAGCGAGGTTCTACCTGATCGGCAGTGATCGTAACAAGAGGTTCTTCCGAGTGTTGAAAATCGATCGATCAGAGCGGTCCGATCTGAATATCAGCCAAGACCCCGTCCTGTATTCGCCCCAGGAGATCAAGAGCTTGCTTCAGCGGATTGCTGAGGGTAACAGAGCCACTGGCGGCCTCACTTTCGTCGCTAAGGTTTTCGGAATTGCTGGCTGCATCAAGTTTCTCGAGTCTTACTACTTGATTCTCGTTACTAAACGTAGACAAATTGGTGCTATATGTGGCCATGCAATCTATAGCATCAAGGAGAGCCAATTGATAACCATTCCACATGTTTCAATCCAATCAGATTTAGCTCACTCTAAGACTGAGCTCAGGTACAAAAAGCTTTTGTCTAGTGTCGATTTGACCAAGGATTTTTTCTTTAGTTACACTTACCCTATAATGCAAAGTTTGCAAAAGAACGTTTCTCCTAGCGAAGACGGAGGGATGTCGTATGATAATATATTTGTTTGGAATGCATATTTGACACAAGCAATCAGGTCAAGATGCAATAACACTATTTGGACCATAGCTTTAGTTCATGGTCATTTTAGGCAGAGTCGTCTATCAATTTTTGGAAGAGACTTCAGTGTTTCTCTGATTTCTAGACGATCGAGACATTTTGCAGGGACACGTTACTTGAAAAGGGGTGTGAATGATCGGGGGAGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAAGAAGCTGGCTCTTGCAAGGGGAAAATGAGTTCAGTTGTGCAAATGCGGGGATCAATACCACTTTTTTGGTCACAAGAAGCATCAAGATTTAGCCCTAAGCCTGACATAATTTTGCAGAGGTATGATCCGACATACGAAGCAACTAAATTGCATTTTGAAGACCTTGCTAAGAGATATGGCAATCCAATTATTGTTCTGAATCTGATTAAGACAGTTGAGAAAAGGCCTCGAGAAATGATGCTGAGGCGTGAATTTGCAAGTGCTGTTGGTTATCTTAACCAAATTCTACCGGTAGAGAACCATCTTAGATTTATTCACTGGGACTTTCACAAATTTGCAAAGAGCAAGTCTGCCAATGTTTTGGCAGTTTTAGGTGCTGTAGCAAGTGAAGCACTTGATTTAACTGGCTTTTACTACAGTGGTAAACCCAATATAATAAAGAGGGTCAACAAGAGTAATCGAACTAGCACAGGGAGGGATTCTTCACTGCGAGATCTGAGAGCTAGTTCTGGTGATATTGTGAGAATTGGGAACAGTAATGAAATGATAAATTCTGTGGTTAACCGAGACAAAGAGACTGACACTAACCATCAGAATAAAAAAGATAATTTAAGTGATGACGCACCACATTTTCAGAGTGGAGTTCTTCGTACCAATTGCATTGACTGCTTGGACCGTACAAATGTTGCCCAATATGCATATGGTCTTCAAGCTTTAGGACGCCAGCTCCATGCAATGGGTTTGACTGATGTGCCAAAAGTGGATCCTGATAGTAGTATCGCTGCAGCTCTAATGGATATGTATCAAAGCATGGGGGATGCTCTTGCCCAGCAGTATGGTGGTTCAGCAGCTCACAATACTGTGTTTCCGGAGAGGCAAGGAAAGTGGAAAGCAACAACACAATCAAGAGAGTTTTTGAAGTCCATAAAACGATATTATAGCAATGCTTACACAGATGGTGAAAAACAAGATGCAATAAACTTATTTTTAGGTTACTTCCAACCACATGAAGGGAAACCTGCTCTCTGGGAGCTGGATTCAGATTATTATCTCCATGTATCTGGGGTTGGGGATGATCTAATTCCTGAGAAGTGTTCTGAACCGAATCCTAAGTCTTCTGAAAGTGGTGGAATAGTATTCACCCCAATACCAGCTTGCAGAGAAGACTTCTTACGGATAAAGTTGACATCGTTTGACAAGTTAATTGAGAAGACCTGTAGTACAATTAAAAATGTAAGACTATGCTCTGAACCTGATCAGAGACCAGGTGGGAGTTCTGGAAACAGTGGAGTGGCACCTGATGCAGCTGAGATACAACTCAAAAGCCCAAATTGGCTTTTTGGCCAGAGAAAGTACGAAGAGGGTTCCTCTGCTGCAAAAGTAGCTTCTCATGAAACTGACGTTGAAGGATCTCATGCTAATGGATTTTGTGACTTGAATTGGCTTTCTTCTGGCAGTGATATAAATGAAGAGGATGTTTTCCAAAGGTACCTTGCAATGACTTCAGCAAATGAGGCGAATGGGTGGTATGGAGGTAGTCTCCTCGGCGATCAAGATGAAAGTAGTGAGATATATAAACATTATGCCGAGCTATGTCAGGGACCTGCCTTGGAACTTTTCCAAAATGACTCTGAGAGGGAGCAACACTACGCAGATGCTTTAAGCACGAGTTCATATGAAATTGTTAATGATACTAGCGTTGCGGCAGAAATGGAAGCAGCTCTACAGGAGTATGACCAAGTTGGTGCTGACCTTGGGATCATTCCCAGATCTTGTAAATTCTTTGCTGGTGATCCGAGTTGGCTTACAAGATGGTTAACTGGGGAAGAAAAACTACAAAGTATATGA 2709 0.4267 MAKSGSTAVSASAKVYPSNDPDPDSYALEKFRLYETRARFYLIGSDRNKRFFRVLKIDRSERSDLNISQDPVLYSPQEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRRQIGAICGHAIYSIKESQLITIPHVSIQSDLAHSKTELRYKKLLSSVDLTKDFFFSYTYPIMQSLQKNVSPSEDGGMSYDNIFVWNAYLTQAIRSRCNNTIWTIALVHGHFRQSRLSIFGRDFSVSLISRRSRHFAGTRYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYEATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFASAVGYLNQILPVENHLRFIHWDFHKFAKSKSANVLAVLGAVASEALDLTGFYYSGKPNIIKRVNKSNRTSTGRDSSLRDLRASSGDIVRIGNSNEMINSVVNRDKETDTNHQNKKDNLSDDAPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDVPKVDPDSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPHEGKPALWELDSDYYLHVSGVGDDLIPEKCSEPNPKSSESGGIVFTPIPACREDFLRIKLTSFDKLIEKTCSTIKNVRLCSEPDQRPGGSSGNSGVAPDAAEIQLKSPNWLFGQRKYEEGSSAAKVASHETDVEGSHANGFCDLNWLSSGSDINEEDVFQRYLAMTSANEANGWYGGSLLGDQDESSEIYKHYAELCQGPALELFQNDSEREQHYADALSTSSYEIVNDTSVAAEMEAALQEYDQVGADLGIIPRSCKFFAGDPSWLTRWLTGEEKLQSI 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g03064 902 ProSiteProfiles Sac phosphatase domain profile. 167 568 IPR002013 GO:0016791
Viun11g03064 902 Pfam SacI homology domain 103 399 IPR002013 GO:0016791
Viun11g03064 902 MobiDBLite consensus disorder prediction 476 494 - -
Viun11g03064 902 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 23 850 IPR043573 GO:0043813|GO:0046856
Viun11g03064 902 MobiDBLite consensus disorder prediction 476 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g03064 Viun-Chr11 41575228 41587632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g03064 1 902 Acyl Lipid Metabolism Gene Families AT1G22620 74.232 0.0 1420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g03064 K22913 - gmx:100800092 1679.84