Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g03043 ATGGCGGAGGGGGAGGAGCTTCGGCCTGACTTGCTGAAAAACACGCCTTCTAACATTGCGAGATTGGAGGATGTGATCGAACACTCTAAAGCAAGGCACAAGTATCTGGCGCAGACGTGTAGCCCCTCTGATGGCGGTGATGTTAGGTGGTACTTTTGTAAGATCCCTCTCGCTCCCAACGAGTTGGCAGCGTCAGTCCCACGAACAGAGATGGTAGGCAAGAGTGACTATTTTCGTTTTGGCATGAGAGATTCTCTAGCCATTGAAGCATCTTTCTTGCAGAGAGAGGAAGAACTGCTTTCTAGTTGGTGGAGGGAGTATGCGGAATGCAGTGAAGGCCCAAGAGAACGGCAGAGTTCCAGTACAAAATCAGATACTGGATCTTTTTTGGGACGTACTGAACCGTCTCAACTCTATGAAATAGAAGAAGAGAGGGTTGGTGTCCCTGTAAAGGGAGGACTGTACGAGGTAGACTTGGTTTCCAGACATTGTTTCCCTGTTTATTGGAACGGAGAAAACAGACGTGTCCTAAGAGGTCATTGGTTTGCACGTAAAGGGGGCCTGGATTGGCTACCACTTCGCGAAGATGTTGCTGAACAACTAGAGATTGCTTATCGTAGTCAGGTTTGGCACCGAAGAACATTTCAACCATCAGGACTTTTTGCTGCTCGAGTTGATTTGCAAGGCTCCACTCAGGGCCTGCATGCCCTTTTCACAGGAGAAGACGATACCTGGGAGGCCTGGCTAAATATTGATGCTTCTGGCTTTTCTAGTTTTGTTAGTTTTACTGGAAATGCTATCAAGCTTAGGCGTGGTTACTCTCCATCAAATTCTCCAAAACCAACCCAGCAGGATGAACTAAGACAGCAGAAGGAGGAGGCTATGGATGATTACTGCTCCCAGGTCCCTGTTCGACACTTGGTATTTATGGTTCATGGTATTGGCCAAAGGTTGGAAAAATCCAATTTGGTTGATGATGTGGGCAATTTCCGGCATATTACAGCAAGTCTTGCAGAGCAGCACCTTACTGCTCATCAGCGTGGCACCCAAAGGGTCCTCTTTATCCCATGCCAGTGGAGAAAAGGTTTGAAGCTGAGTGGTGAAACTGCTGTTGAAAAAATAACATTAGATGGAGTGCGGGGATTGCGTGTCACATTGAGTGCAACTGTTCATGATGTATTATACTACATGAGCCCAATTTACTGTCAAGACATAATTGACTCGGTATCCAACCAATTGAATCGATTATATCTGAAGTTTCTCAAAAGGAATCCTGGATATGATGGAAAGGTTTCATTATATGGTCATTCTCTGGGAAGTGTTCTCTCGTATGATATCCTTTGCCATCAAGATAATCTATCATCCCCATTTCCAATGGAATGGATGTATAAGGAACATGATCAAAATGAAAACTCACTCCCTGATAAGGAATATAATCATGTGCAGAACTCACTAATCAATCAGGATGACACTTTTAGTATGGTGAGTCCCTCTGAAGAAAATAAGGGTACTCAGCATACTAGTCCAGATATGGAGGCAGAATATTGTGAGAAGTCCTCAGTTTTAGGCCCCGAGTTATCAAGTCTACATGAATTTTCTGCAGAACCTAGCTCTGTGGAACCAAGTAACAAGGGAGATGTTTCTGAGTTCCTTTCTGATTCCAGCTACACACATGTTGATAAAATGGGTGCATTGGATGAGCCTGAGAGCATGAATGTTGGGTTTCCAGTAGATAAGGAAGAATGTACAGTTACAAGAAATAAAGATGAAGTAATAAACAAACTCAGAGAAGAGATTGATTCATTGAGAGCTGAACTGGAATCACGTCATAGCATTAATCATACCGAGGAAGAGTTACATTCTGTACAGAATTTATCTAAAAAGTCACCTCCCATACAAGATGCACCAAAGAGTTATACCCCATATATAAAGTACACAAAGCTTCAGTTCGAGGTCGATACATTCTTTGCTGTTGGATCTCCTCTTGGTGTATTTCTTGCACTTCGTAATATCCGCATAGGCATTGGTAAAGGACAAGAATATTGGGAGCAGGAAAATATAAGAGAAGAGATGCCAGCTTGTCGGCAGTTGTTCAACATTTTTCATCCGTACGATCCAGTAGCATACAGGATTGAGCCACTTGTCTGTAAAGAATACATCAGCCAACGACCAATTTTGATTCCATATCACAGAGGAGGGAAAAGGTTGCACATTGGATTTCAGGAATTTACTGAAGACTTAGCTGTTCGAACTCACGCAGTAAAGAATTATATGAAATCTGCAAGGGATAGGGTAATCACTTTGTGTCAGTCGAGGAAATTGGATAACATAGGAGGGGAGAGTTCGGAAGAGGAAGAAGAGACATCATATGGATCTTTCATGATAGAGAGGTTAACAGGAAGTAAGAGTGGTCGGATTGATCACATGCTTCAGGACAAGACCTTTGAGCATCCATATCTGCAAGCAATTGGAGCACATACAAATTATTGGCGGGACTATGATACCGCACTTTTCATATTGAAACACCTGTATCGAGATACACCAGAAGACCAAGATATAATAGAAGATCCCGATTTGTCAGTCGTATCTAGCATGGACAAATCAATACACGAGAGTACCTCTGTTGGCTGGTATGAACCAAGAGACACTATAGAGGAAGATCTTCCGTTAACTTTCTCGGACAAGGTTATGGTTCGAAGCTTCTCGAGCAAAGCTAAGAAGGTTCTGCAGAAGCACACTGCGTCTAATTACTAA 2754 0.4306 MAEGEELRPDLLKNTPSNIARLEDVIEHSKARHKYLAQTCSPSDGGDVRWYFCKIPLAPNELAASVPRTEMVGKSDYFRFGMRDSLAIEASFLQREEELLSSWWREYAECSEGPRERQSSSTKSDTGSFLGRTEPSQLYEIEEERVGVPVKGGLYEVDLVSRHCFPVYWNGENRRVLRGHWFARKGGLDWLPLREDVAEQLEIAYRSQVWHRRTFQPSGLFAARVDLQGSTQGLHALFTGEDDTWEAWLNIDASGFSSFVSFTGNAIKLRRGYSPSNSPKPTQQDELRQQKEEAMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASLAEQHLTAHQRGTQRVLFIPCQWRKGLKLSGETAVEKITLDGVRGLRVTLSATVHDVLYYMSPIYCQDIIDSVSNQLNRLYLKFLKRNPGYDGKVSLYGHSLGSVLSYDILCHQDNLSSPFPMEWMYKEHDQNENSLPDKEYNHVQNSLINQDDTFSMVSPSEENKGTQHTSPDMEAEYCEKSSVLGPELSSLHEFSAEPSSVEPSNKGDVSEFLSDSSYTHVDKMGALDEPESMNVGFPVDKEECTVTRNKDEVINKLREEIDSLRAELESRHSINHTEEELHSVQNLSKKSPPIQDAPKSYTPYIKYTKLQFEVDTFFAVGSPLGVFLALRNIRIGIGKGQEYWEQENIREEMPACRQLFNIFHPYDPVAYRIEPLVCKEYISQRPILIPYHRGGKRLHIGFQEFTEDLAVRTHAVKNYMKSARDRVITLCQSRKLDNIGGESSEEEEETSYGSFMIERLTGSKSGRIDHMLQDKTFEHPYLQAIGAHTNYWRDYDTALFILKHLYRDTPEDQDIIEDPDLSVVSSMDKSIHESTSVGWYEPRDTIEEDLPLTFSDKVMVRSFSSKAKKVLQKHTASNY 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g03043 917 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 32 851 - -
Viun11g03043 917 Pfam DDHD domain 648 765 IPR004177 GO:0046872
Viun11g03043 917 Pfam DDHD domain 801 844 IPR004177 GO:0046872
Viun11g03043 917 Coils Coil 585 612 - -
Viun11g03043 917 MobiDBLite consensus disorder prediction 612 633 - -
Viun11g03043 917 SUPERFAMILY alpha/beta-Hydrolases 396 467 IPR029058 -
Viun11g03043 917 SMART DDHD_2a 648 845 IPR004177 GO:0046872
Viun11g03043 917 MobiDBLite consensus disorder prediction 271 292 - -
Viun11g03043 917 ProSiteProfiles DDHD domain profile. 648 845 IPR004177 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g03043 Viun-Chr11 41479959 41499167 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g03043 3 911 Acyl Lipid Metabolism Gene Families AT1G31480 63.298 0.0 1152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g03043 - - gmx:100777360 1620.91