Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02999 ATGAACACTGATCCAAAAACTCCATTGTTGAGTCCTCCAAGCTCCCTAACAAGGGAAAGTGGGGGAAGAACACAAAAGGGTGTCCTTATTTTCATTCTTTCCATCGTTTTCCTCATGTCATTTTCTGCACTCGTCATAAGCCTCCATAGCCATCAACCCTTCCTAAGTAATATTGAGAAGCCTCTCACGACCAGAGTTAACTCAAAGTCCAAACAGGTCTTTCAAACTTTTGAATCATCTCTGCTGAAGACAGCGTTGCCATGGTCACTGCCATTGCATCCTCGAGGTGTTGCAGAAGGGGTTTCAGCAAAGTCGAATCCATATCTGTTGCAGAAAGGTTCATATAACTGGACAAATGCCATGTTATCGTGGCAAAGAACAGCTTTCCATTTTCAACCGCAAAGAAACTGGATGAACGATCCTAACGGTCCATTGTTTTACAAGGGGTGGTACCATTTATTTTACCAATACAATCCTGACTCAGCTGTGTTTGCAAACATAACGTGGGGCCACGCTGTATCCAGAGACTTGATTCACTGGCTCTATCTTCCCATCGCGATGATTCGAGATTCCTGGTACGATATCAACGGTGTATGGTCAGGATCAGCCACACTTTTGCCAGATGGCAAAATCGTGATGCTCTACACCGGTAGCACCCATCAGAACGTGCAAGTCCAAAATCTTGCGTACCCCGCCAACCTATCTGATCCGCTTCTCATTCATTGGGTAAAATACGCTGATAACCCGCTCTTGGAGCCCCCACCGGGAATTGGGCCAAAGGATTTTCGTGACCCAACAACTGCGTGGATTGGGCCAGATGGCAAATGGAGGATCGCTATTGGGTCAAAGATCAACCAGACGGGTCTTTCGTTGGTTTATAAAACCCAAGATTTTATCCACTACGAACTCAATGATCAGTACATGCATGAAGTCCCGGGTACGGGTATGTGGGAGTGCGTGGACTTTTACCCGGTTTCAGTAAATGGGTCTGATGGGTTGGATACTTCTGCAAATGGGCCAGATGTGAAACACGTGTTGAAGTCCAGTTTGGATGACACTAGAGGGGATCATTATGCGATTGGGACCTACTTCATTGAAAATGATACATGGGTGCCCGATAACCCGGATGAGGATGTGGGTATCGGGTTGAAATTGGACTATGGAAGATTCTATGCGTCAAAGACATTTTATGACCAATACAAAAAGAGAAGGGTCCTGTGGGGTTGGATCAACGAATCAGACAGCGAAACCGCTGACTTGAAAAAGGGTTGGGCATCTCTTCAGAGTGTTCCAAGAACAGTGGTGTTTGACACGAAAACTAGAGCCCATTTGCTTCAGTGGCCGGTGGAAGAAATAGAGAGCTTAAGGCTTAGCAGTTATGAATTTGAAGAAGTTGTGGTTAAGCCTGGCTCAGTTGTGCCACTGGACATAGGCCCTGCCACACAGTTGGACATATTTGCTGAATTTGAAATCGAATATTTAGTTTCGAAAGAGGCCGAGAAGAAGGAAAATGTAGGGTGTGGAAATGGAGCTTTTGACAGAAGTAGTCTGGGACCATTTGGCATTCTGGCTATTGCAGATGACCAACTTTCTGAGCTGACACCAATTTATTTCCATCTTTCTAGTACTACCACCAGTTTAACATCTTCCTTCTGTGTTGATGAAACCAGGTCTTCAATGGCTCCTGATGTTTCAAAACTTATTTTTGGAAGCCCAGTTCCAGTGGTCAGTGATGAAAGATTATCAATGAGGGTATTGGTGGACCATTCAGTCATTGAGAGCTTTGCTCAGGGAGGGAGAACTGTGATTTCATCCAGAGTTTATCCAACAAAAGCAATTTACGAAGCTGCAAGATTGTTTTTGTTCAACAATGCAACAGACATAAACATCAAGGCCTCACTCAAGATTTGGCAACTGAACTCAGCTTTTATACGTCCCTTTCCCTTTGACAATAAGTTGTGA 1962 0.446 MNTDPKTPLLSPPSSLTRESGGRTQKGVLIFILSIVFLMSFSALVISLHSHQPFLSNIEKPLTTRVNSKSKQVFQTFESSLLKTALPWSLPLHPRGVAEGVSAKSNPYLLQKGSYNWTNAMLSWQRTAFHFQPQRNWMNDPNGPLFYKGWYHLFYQYNPDSAVFANITWGHAVSRDLIHWLYLPIAMIRDSWYDINGVWSGSATLLPDGKIVMLYTGSTHQNVQVQNLAYPANLSDPLLIHWVKYADNPLLEPPPGIGPKDFRDPTTAWIGPDGKWRIAIGSKINQTGLSLVYKTQDFIHYELNDQYMHEVPGTGMWECVDFYPVSVNGSDGLDTSANGPDVKHVLKSSLDDTRGDHYAIGTYFIENDTWVPDNPDEDVGIGLKLDYGRFYASKTFYDQYKKRRVLWGWINESDSETADLKKGWASLQSVPRTVVFDTKTRAHLLQWPVEEIESLRLSSYEFEEVVVKPGSVVPLDIGPATQLDIFAEFEIEYLVSKEAEKKENVGCGNGAFDRSSLGPFGILAIADDQLSELTPIYFHLSSTTTSLTSSFCVDETRSSMAPDVSKLIFGSPVPVVSDERLSMRVLVDHSVIESFAQGGRTVISSRVYPTKAIYEAARLFLFNNATDINIKASLKIWQLNSAFIRPFPFDNKL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02999 653 Gene3D Glycosyl hydrolase domain; family 43 134 459 IPR023296 -
Viun11g02999 653 SUPERFAMILY Concanavalin A-like lectins/glucanases 448 643 IPR013320 -
Viun11g02999 653 Pfam Beta-fructofuranosidase, N-terminal domain 8 122 IPR021792 GO:0004564
Viun11g02999 653 CDD GH32_Fruct1-like 136 434 - -
Viun11g02999 653 Gene3D - 460 639 - -
Viun11g02999 653 MobiDBLite consensus disorder prediction 1 21 - -
Viun11g02999 653 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 134 460 - -
Viun11g02999 653 Pfam Glycosyl hydrolases family 32 N-terminal domain 130 448 IPR013148 -
Viun11g02999 653 SMART glyco_32 130 599 IPR001362 GO:0004553|GO:0005975
Viun11g02999 653 Pfam Glycosyl hydrolases family 32 C terminal 451 638 IPR013189 -
Viun11g02999 653 ProSitePatterns Glycosyl hydrolases family 32 active site. 130 143 IPR018053 GO:0004553|GO:0005975
Viun11g02999 653 SUPERFAMILY Arabinanase/levansucrase/invertase 123 449 IPR023296 -
Viun11g02999 653 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 74 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02999 Viun-Chr11 41282713 41288507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02999 95 647 Glycoside Hydrolase AT1G12240 62.937 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02999 K01193 - gmx:100814788 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02999 11 41282713 41288507 Viun11g02999 11 41282713 41288507 ECH