Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02984 ATGGACCTGAAATGTGATGGCAATTCAATGGGAGATGTTGTGAAGCTAATGAAAGTAGTGTGGATGAGTTTCCCACTTGGAATATTTATTACAATTGTAGTATGCCTTTTTGTCTTCTGGTGGCAACAAATAAGTTATAGTAGTCCACATGGGCAAGCTATCTTGATCAATGGTTTTGCATGTATTTTGGAGCTCTTGGCTGAGCCTGCGTACATTCTCTCACAAAGCTTGGTTTTACTTGAATTACGGCTGATGGTTGAGACTATAGCCACTCTGTTACGATGCTTGACAATGTATTTTCTAATCAGCAAGCAAATTGGAATTGAAAAATCAATCATTTTTGGTTTGTCACAGTCTGCATATGGAGCCAGCTTATTTCTTGGTTATTGGGGCTATCTTTTGCTTTCCCAAAAATTGAAGGTTTCATACCTCTTTCCATTCAGAAAAGGGAAACTGATTGATTTTGACCAGCAGCTGTCCAAGATGTGTATACTGTTTACCTTTCAATCCTTTCGAAAATTGATCCTTCAGGAAGGAGAAAAGATAGTACTTGTATGGTTGGATACACCATATAATCAGGCAGTATACGGCGTGGTGGACAAATTGGGTAGCTTAGTGGTGAGACTTGTCTTTTTACCTTTTGAAGAAAGTTCGTATGCAACATTTGCAAGGTCTGCTTCAGGAGAATATCCAGGAAAAAGCAAGAAATTGGGAAATGGTTTGACGGAATCCCTTAAGTTAGTTTTGTTGATTGGCCTTGTTTTTATGGCATTTGGTCCAAGTTATTCTTATTCACTCATTAGATTGCTTTATGGTGAAAAATGGAGTGATGGAGAAGCGTCAACTGCCCTCCGCTGTTATTGCTTTTATGTCATTGTTTTGGCCATGAATGGAACCTCTGAAGCCTTTATGCATGCAGTTGCAACCGAGAGCCAACTCAAGCGATCCAATGATTCACTACTTATATTCTCGTTGATCTATATAGTTTTGAATGTCCTGTTAATAAGGGTAGCCGGGGCTGTTGGCTTGATAATGGCAAATTCTCTCAATATGACCCTGAGGATTTTATACTCTGCTATATTCATAAAGAAGTACTTCCAGGGATCTTCCTCATTTTCTTTCTATGGATGCTTGCCTTCAGGATGGATTATTCTGTTAATTTCCGGCATAATCACTCTCATTTCTGAGAATGTATTTTTGGACCGAGATAATTTCTGGCCATCATTCATGGTTCATGTCTCTGTTGGGCTGGCTTGCTTCTGTGTGTCATCATACGTGATCTATTGCCGGGAAAAAACTTTCATCAGAAGACTCATTCGCTTTAATGATCATGTGGACTGA 1341 0.3922 MDLKCDGNSMGDVVKLMKVVWMSFPLGIFITIVVCLFVFWWQQISYSSPHGQAILINGFACILELLAEPAYILSQSLVLLELRLMVETIATLLRCLTMYFLISKQIGIEKSIIFGLSQSAYGASLFLGYWGYLLLSQKLKVSYLFPFRKGKLIDFDQQLSKMCILFTFQSFRKLILQEGEKIVLVWLDTPYNQAVYGVVDKLGSLVVRLVFLPFEESSYATFARSASGEYPGKSKKLGNGLTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRCYCFYVIVLAMNGTSEAFMHAVATESQLKRSNDSLLIFSLIYIVLNVLLIRVAGAVGLIMANSLNMTLRILYSAIFIKKYFQGSSSFSFYGCLPSGWIILLISGIITLISENVFLDRDNFWPSFMVHVSVGLACFCVSSYVIYCREKTFIRRLIRFNDHVD 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02984 446 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 11 442 IPR007594 GO:0006488|GO:0016020
Viun11g02984 446 Pfam Rft protein 12 439 IPR007594 GO:0006488|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02984 Viun-Chr11 41211046 41219516 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02984 K06316 - gmx:100817452 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02984 11 41211046 41219516 Viun11g02984 11 41211046 41219516 ECH