Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02973 ATGAGGAACAATCATGTGCGTTTGAACTGCGGCATTACAATGCCTCTTATAGGATTAGGCACTTATTCCTTCCCAAATGATAGGAACACAACAGAACTTGCCGTTCACAATGCCCTTGAGATGGGTTATAGGCATTTTGACACAGCGAAAATATATGGTTCTGAACCAGCATTGGGCAAAGCTTTGAATGAGGCAATCTGCGAGGGAGTAGTGGAGAGAGAAGACATTTTCTTAACTTCAAAACTGTGGGGGAGTGATCACCATGATCCTGTTTCTGCATTGAAGCAAACTCTAGAGAATGTGGGTATGGAGTACCTAGACATGTACCTAGTGCACTGGCCAGTGAAGTTGAAGCCATGGGTTAACTACCCTGTACCTAATGAAGATGACTTTGAAAAGTTGGATCTTGAAAACACATGGAGAGGGATGGAGAAATGCCTTGAAATGGGGTTGTGTAGGTGCATTGGGGTCAGCAATTTCTCTACCAACAAGATTCAATCCTTATTGGATCATGCTTCTACAACTCCAGCTGTAAATCAGGTGGAAATGCATCCAATGTGGAGGCAAGAGAGGCTTAGAAAGACCTGTGGGGACCACAAGATCCATGTGAGTGCTTATTCACCACTTGGTGGACCAGGGAATGCATGGGGATCAACGGCTGTGGTTAATCACCCAATAATCAGATCAATTGCCTTCAAACACAGAGCAACTCCTGCACAGGTTGCATTGAACTGGGGACTATCAAAGGGTTCAAGTGTGATTGTGAAAAGCTTCAATGGAGAAAGAATGAAGGAAAATATGGGATCGTTTGATCTGAGATTGGACGATGAAGATATGTTGGAGATTGAGAAATTGGAGGAGATGAAGATTATGAGAGGGGAGTTTCACGTTAATGAAACCACAAGTCCCTACAAAACCATTGAAGAACTTTGGGACGGTGAAATTTGA 948 0.4335 MRNNHVRLNCGITMPLIGLGTYSFPNDRNTTELAVHNALEMGYRHFDTAKIYGSEPALGKALNEAICEGVVEREDIFLTSKLWGSDHHDPVSALKQTLENVGMEYLDMYLVHWPVKLKPWVNYPVPNEDDFEKLDLENTWRGMEKCLEMGLCRCIGVSNFSTNKIQSLLDHASTTPAVNQVEMHPMWRQERLRKTCGDHKIHVSAYSPLGGPGNAWGSTAVVNHPIIRSIAFKHRATPAQVALNWGLSKGSSVIVKSFNGERMKENMGSFDLRLDDEDMLEIEKLEEMKIMRGEFHVNETTSPYKTIEELWDGEI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02973 315 PRINTS Aldo-keto reductase signature 143 160 IPR020471 GO:0016491
Viun11g02973 315 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Viun11g02973 315 PRINTS Aldo-keto reductase signature 221 245 IPR020471 GO:0016491
Viun11g02973 315 PRINTS Aldo-keto reductase signature 96 114 IPR020471 GO:0016491
Viun11g02973 315 PRINTS Aldo-keto reductase signature 177 206 IPR020471 GO:0016491
Viun11g02973 315 FunFam NADPH-dependent codeinone reductase 1-1 3 315 - -
Viun11g02973 315 Pfam Aldo/keto reductase family 17 286 IPR023210 -
Viun11g02973 315 SUPERFAMILY NAD(P)-linked oxidoreductase 6 285 IPR036812 -
Viun11g02973 315 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
Viun11g02973 315 PIRSF AKR 1 309 IPR020471 GO:0016491
Viun11g02973 315 Gene3D - 4 315 IPR036812 -
Viun11g02973 315 ProSitePatterns Aldo/keto reductase family signature 2. 143 160 IPR018170 GO:0016491
Viun11g02973 315 PANTHER ALDO/KETO REDUCTASE 5 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02973 Viun-Chr11 41148118 41150186 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02973 - K00002 gmx:100786497 606.675