Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02956 ATGACGAAGCTTGCAGGATATTCCCTGGCCGTTTCATTTGCTCCCACAGGTTCCAATATCCTTAAAAACAATGGCAGATTCCCAGTAGTTATATCTCGTAGGAATAAGTTCAGCTATGGGTTATTTTCTACTCGTGCTCTGAAAGCACAATTACATGATAAGCCTGGAGTGGGTTCCAGATATTATCTTCCTCCTTGGTTTAGTGTTGCTCCAATGATGGAATGGACGGACAATCACTATAGGACTCTAGCACGCCTCATATCAAAACATGCTTGGCTATACACGGAGATGGTTGCAGCTGAAACAATTGTTCATCAAAAGGACAATCTGGACAGATTCTTGGCATATTCTCCAGACCAACATCCCATTGTGCTTCAAATTGGAGGGAGCAATATAGAAAAATTGGCTAAAGCAACTGAGCTTGCTAATGCTTATTGCTATGACGAGATCAACTTAAACTGTGGATGCCCTAGTCCAAAAGTTGCTGGGCATGGGTGTTTTGGTGTGAGTCTTATGCTTAACCCCAAGTTTGTTGCTGAGGCCATGTCAGCAATTGCTGCCAGCACGAATGTACCTGTCAGTGTCAAATGTCGAATTGGCGTGGATGATCATGATTCTTATAATGAGCTTTGTGATTTCATATACCAGGTTTCTTCTTTATCACCCACTAAACATTTTATAATTCACTCAAGGAAGGCACTGCTCAACGGTATTAGCCCTGCTGAGAATAGAAGCATTCCTCCGCTAAAATATGAATACTTCTATGGCCTCCTACGTGACTTTCCTGATCTAACATTTACAATCAATGGCGGCATTACTAGTGTTGACGAGGTCCGTGCGTCTCGAGAAGCTGGGGCTCATGGTGTTATGGTCGGACGTGCAGCGTACAACAATCCTTGGCATATTTTGGGGCACGTAGATTCTGCAATTTATGGTACACCAAGTCCTGATGTTACACGTCGTCAGGTCCTTGAAAAATATCTAGCCTATGGGGAGTCGGTGATGGGAAAATATGGACGTAGGCCAACTATGCGAGATATTATGAAGCCTTTACTCAATCTTTTCCATTCAGAACCTGGGAATGGACTATGGAAGCGCAAAGCTGATGCCGCTTTCAAAAATTGCACGACTGTCGAATCATTTTTTGAAGAAACCCTTGTGGCAATTCCCGACTCGGTATTGGATTCGCCTGTTGCCAAACTACCACCTGGCCGTAGAGATCTTTTTGCCAACATACACAGTTTATTGCCTCCGCCATACAGAACAAGAGAAGAAGAGGCAGTGGTCATTTGCGCTTAA 1299 0.4373 MTKLAGYSLAVSFAPTGSNILKNNGRFPVVISRRNKFSYGLFSTRALKAQLHDKPGVGSRYYLPPWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMVAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNIEKLAKATELANAYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAEAMSAIAASTNVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVRASREAGAHGVMVGRAAYNNPWHILGHVDSAIYGTPSPDVTRRQVLEKYLAYGESVMGKYGRRPTMRDIMKPLLNLFHSEPGNGLWKRKADAAFKNCTTVESFFEETLVAIPDSVLDSPVAKLPPGRRDLFANIHSLLPPPYRTREEEAVVICA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02956 432 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 60 426 IPR004653 GO:0002943|GO:0017150
Viun11g02956 432 Gene3D Aldolase class I 63 306 IPR013785 -
Viun11g02956 432 SUPERFAMILY FMN-linked oxidoreductases 66 367 - -
Viun11g02956 432 Gene3D - 315 379 - -
Viun11g02956 432 Pfam Dihydrouridine synthase (Dus) 69 377 IPR035587 -
Viun11g02956 432 CDD DUS_like_FMN 67 300 IPR035587 -
Viun11g02956 432 FunFam tRNA-dihydrouridine(20/20a) synthase 64 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02956 Viun-Chr11 41062023 41067234 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02956 K05539 - gmx:100779457 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02956 11 41062023 41067234 Viun11g02956 11 41062023 41067234 ECH