Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02943 ATGGCATTTCACGTAGCTTGTCCAATTACATGTCGCCGAATCTGTTTCTGCGCGCTAGGGTTTCCTCGCGGCCTTCACGCTTCCGACGACGGTTCCGCTGCCAATGGCTTTGCTCAGGACGTCGGCGCGCTCCGTGACTTTCTTGCCGACACATGCAGGGACGATGCCACCGTTCAGGTTCCTGTCCCCAAGGTTCTGCCGCCGCCTCCGCCGCCGCCGGACGGGATTCCTCTCAACGCCGACGCGCTGGATGAGTCTGCCTCCATGAAGGCCAAGCGCATCGCGCTACAGCGCAAGGGCGCCGCCGCCATGATCGCCGCCGAGGAGTACGCCCGCCGCTTTGAGTCCGGCGACGTTGTGAATACTCCAGGAAATGTTACCGGAGAGGAGCAGGGGCAAGCTAATAGGAGCTATTGTCGAATTTGCAAGTGCGGAGAGAATGAAGGAAGTGAGAAAGCTCAGAAGATGCTGTCGTGCAAAAGTTGTAGTAAAAAGTACCACAGGAACTGCTTGAGAAGTTGGGGTCGAAATAGAGATTTATTTCATTGGAGTTCATGGACCTGTCCTCTTTGCCGAATTTGTGAGGCTTGCAGAAGGACTGGTGATCCAAGTAAGTTCATGTTTTGCAAAAGGTGCGATGGTGCTTATCATTGTTACTGTCTGCAACCTCCTCATAAGAGTGTTTGTAATGGGCCCTATTTGTGCACAAAACATGCAAGGTGTCACAGTTGTGGGTCAAATGTCCCTGGAAATGGATTAAGTGTGAGGTGGTTTATGGCATACACAAACTGTGATGCATGTGGAAGATTGTTTACAAAAGGGAACTACTGTCCCGTTTGCTTGAAGGTCTACAGAGATTCAGAATCAACACCTATGGTTTGCTGTGATACTTGCCAGCTTTGGGTACATTGTCAGTGTGATAATATCAGTGATGAAAAATATCACCAGTTTCAAGTGGATGGGAATTTACAGTATAAGTGTCCCACTTGTCGTGGGGAATGTTATCAGGTCAAGAATCCTGAAGATGCTGCACAAGAGATTTGGAGGAGAAGGAATGTTGCTGAGAGAGATTTGATTGCTAGCTTGAGGGCTGCAGCTGGTTTGCCCACTCAAGATGAGATATTTTCCATTTCACCATTTTCAGATGATGAGGATAGTGGGCCTTTAAAATTAAAGAGTGAATATACCCGTTCCTTTAAGTTCTCTCTGAAGAATTTGGCAAATGACTCACCAAAGAAGAAATCTTCAAGCAAAAAAACTGCCAAGAAAAAAGACTCTGAGTCATTTATGACTAATAAAGTTGACACACATAATAGTTTTGATGGACACAGTGATATTAAATCTGTGCATAGCTTAGACGACGACAAGAATGATGATATACAATCCCAGAGAAATGATGGTCCAGATGTTTACTCATCACCTGCTACTGGAAGTTTGAGTCAAACTGAAGCATCTTTCCCTATTAGTCAACCAGGAGTTTTGAAGCATAAGTTTGTTGATGAGGTGATGGTCAGTGATGAAGAGAGGAAACCTAGAGTTGTTCGAATTAAAAGCAACAAGCCAAATATTCTGGATAGTGAAGAGGAAAGTGGAAAGCAGAGTGTTAAAACTCAGAATGTGAAAGGGAAGAAGCTGGTCATAAATTTGGGAGCACGGAAAATTAATGTGGCCAGTTCCCCACGGTCTGATACGTCAAGCTGCCAAAAAGATCAAGATCTGGTCACTGTTAATGGTAATGAAGATATAAGCCAATCCAAGAAGGGAGACAGATTTGCATTAGATAAACAAGACGGCACTGCTAGGCATATTGATGGAAAAGGAAATAGAGTTGACTCTGGACAATCAAAACTTTTTACCGTTTCGGGAAGAGAAGGAAATTTGATTAAGCTGGGAAAAGTTAAGCCAGATGTTTCTGAATTCAACCCAACTGCCGGTAGAGGCAATATGTCTGATGGGCGTATAAAACATAGTATTGATGGGATGATTGGTCAGGTTGGAATCAAAGCCACATCAAGAGGTGAAAGGACGAATTTGGGAAAGCAATCAGAAGGTAGCTCTGATGCAAATGATGAGGTAGATGACAATAATAATCGTACACCTTCGCATTCTTTGCCAAAAGATTCTAAACCTTTACTAAGATTTAAATTCAAGAAACCTAGCATTGAAACTCAAAATTCCCCTCATCGGGAGGAGGAGAAGACAACAATCAAGGGCCAGAGGTCAAAAAGGAAGAGACCTTCACCTTTTAAAACATCATTTAATGAGTCTGAAGGCGTAAGTCAATCACATCAAGACAATGCAATGGATGAGATCATGGATGCAAACTGGATTTTAATGAAATTGGGAAATGATGCAATTGGAAAGAGAGTTGAAGTTCATCAGACATCTGACAATTCTTGGCACAAGGGAGTGGTTACTGACGTAGTTGAAGGCACTTCAAAGTTGTATGTTGCGTTAGACGATGGGAAAGTGAAGACCTTGGAACTCAGGAAACAGGGGGTCCGTTTTGTTCCTCAAAAGCAGAAGAGATCCAAGACATGA 2541 0.44 MAFHVACPITCRRICFCALGFPRGLHASDDGSAANGFAQDVGALRDFLADTCRDDATVQVPVPKVLPPPPPPPDGIPLNADALDESASMKAKRIALQRKGAAAMIAAEEYARRFESGDVVNTPGNVTGEEQGQANRSYCRICKCGENEGSEKAQKMLSCKSCSKKYHRNCLRSWGRNRDLFHWSSWTCPLCRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKSVCNGPYLCTKHARCHSCGSNVPGNGLSVRWFMAYTNCDACGRLFTKGNYCPVCLKVYRDSESTPMVCCDTCQLWVHCQCDNISDEKYHQFQVDGNLQYKCPTCRGECYQVKNPEDAAQEIWRRRNVAERDLIASLRAAAGLPTQDEIFSISPFSDDEDSGPLKLKSEYTRSFKFSLKNLANDSPKKKSSSKKTAKKKDSESFMTNKVDTHNSFDGHSDIKSVHSLDDDKNDDIQSQRNDGPDVYSSPATGSLSQTEASFPISQPGVLKHKFVDEVMVSDEERKPRVVRIKSNKPNILDSEEESGKQSVKTQNVKGKKLVINLGARKINVASSPRSDTSSCQKDQDLVTVNGNEDISQSKKGDRFALDKQDGTARHIDGKGNRVDSGQSKLFTVSGREGNLIKLGKVKPDVSEFNPTAGRGNMSDGRIKHSIDGMIGQVGIKATSRGERTNLGKQSEGSSDANDEVDDNNNRTPSHSLPKDSKPLLRFKFKKPSIETQNSPHREEEKTTIKGQRSKRKRPSPFKTSFNESEGVSQSHQDNAMDEIMDANWILMKLGNDAIGKRVEVHQTSDNSWHKGVVTDVVEGTSKLYVALDDGKVKTLELRKQGVRFVPQKQKRSKT 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02943 846 MobiDBLite consensus disorder prediction 464 488 - -
Viun11g02943 846 ProSitePatterns RecR protein signature. 264 286 IPR015967 GO:0006281|GO:0006310|GO:0046872
Viun11g02943 846 ProSiteProfiles Zinc finger PHD-type profile. 274 333 IPR019787 -
Viun11g02943 846 MobiDBLite consensus disorder prediction 708 738 - -
Viun11g02943 846 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 243 IPR013083 -
Viun11g02943 846 MobiDBLite consensus disorder prediction 583 609 - -
Viun11g02943 846 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 192 IPR013083 -
Viun11g02943 846 MobiDBLite consensus disorder prediction 408 491 - -
Viun11g02943 846 CDD RING-H2 139 192 - -
Viun11g02943 846 FunFam PHD finger family protein 271 333 - -
Viun11g02943 846 MobiDBLite consensus disorder prediction 411 431 - -
Viun11g02943 846 SUPERFAMILY FYVE/PHD zinc finger 273 332 IPR011011 -
Viun11g02943 846 MobiDBLite consensus disorder prediction 670 685 - -
Viun11g02943 846 PANTHER HL01030P-RELATED 121 590 - -
Viun11g02943 846 MobiDBLite consensus disorder prediction 505 539 - -
Viun11g02943 846 FunFam PHD finger family protein 133 248 - -
Viun11g02943 846 MobiDBLite consensus disorder prediction 505 534 - -
Viun11g02943 846 SMART PHD_3 141 192 IPR001965 -
Viun11g02943 846 SMART PHD_3 193 239 IPR001965 -
Viun11g02943 846 SMART PHD_3 276 331 IPR001965 -
Viun11g02943 846 MobiDBLite consensus disorder prediction 438 463 - -
Viun11g02943 846 SMART ring_2 277 330 IPR001841 -
Viun11g02943 846 SMART ring_2 139 191 IPR001841 -
Viun11g02943 846 ProSiteProfiles Zinc finger PHD-type profile. 136 194 IPR019787 -
Viun11g02943 846 ProSiteProfiles Zinc finger RING-type profile. 139 192 IPR001841 -
Viun11g02943 846 MobiDBLite consensus disorder prediction 580 615 - -
Viun11g02943 846 ProSitePatterns Zinc finger PHD-type signature. 139 191 IPR019786 -
Viun11g02943 846 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 271 333 IPR013083 -
Viun11g02943 846 MobiDBLite consensus disorder prediction 667 764 - -
Viun11g02943 846 SUPERFAMILY FYVE/PHD zinc finger 130 192 IPR011011 -
Viun11g02943 846 SUPERFAMILY FYVE/PHD zinc finger 183 244 IPR011011 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02943 - - gmx:100815407 1548.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02943 11 40991480 40998700 Viun11g02943 11 40991480 40998700 ECH