Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02907 ATGATGAGAACGCTGTCTACCCAATTTCGTTCCATCAAATGCCCTAATCCAAACCCTAAATTATCTAAATCGTCCTCTCCGACAAAATCAGAACTAAAATTCGATGCCAAACCAAAACCAGAGTCAGAGTCATGGTGTGTTTATCTCATCCTTTCCACCAACCATCCAATCAAAACCTATGTTGGCATCACAAACAACTTCCCTCGCCGTTTGAAGCAGCACAACGGGGAACTTAACGGTGGTGCAAAGGCATCCCGTGCTGGAAGGCCTTGGATTTGTGCATGCCTCATTTGCGGTTTTGCAGACCGACGTGAAGGACCTTCTTTGAGTCCAGAAATGTTGTTTTCAGGAAACTACCTTCGGTTTTCTTACTCTCCTGTGCACAAATTTTTATCGTGA 399 0.4436 MMRTLSTQFRSIKCPNPNPKLSKSSSPTKSELKFDAKPKPESESWCVYLILSTNHPIKTYVGITNNFPRRLKQHNGELNGGAKASRAGRPWICACLICGFADRREGPSLSPEMLFSGNYLRFSYSPVHKFLS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02907 132 ProSiteProfiles GIY-YIG domain profile. 43 132 IPR000305 -
Viun11g02907 132 Pfam GIY-YIG catalytic domain 45 106 IPR000305 -
Viun11g02907 132 MobiDBLite consensus disorder prediction 1 29 - -
Viun11g02907 132 PANTHER STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 26 105 - -
Viun11g02907 132 Gene3D - 39 113 IPR035901 -
Viun11g02907 132 SUPERFAMILY GIY-YIG endonuclease 44 86 IPR035901 -
Viun11g02907 132 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02907 Viun-Chr11 40824891 40826350 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02907 K15078 - gmx:100805152 182.956