Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02904 ATGAAACAATCACACTTCAATGTCTCTTCTCAAAATTTTGTTTCAGTGACACACAACTCACGTAGATCTGCAAACTATAAACCAAACATTTGGAAACACCACTTTCTGCAGTCACTTCACACTAAATATCATAAGGAAGAATTTGTGATGCTGTTAAACAAGCGTGTGATGGAAGTGAAGAGTGTATTTGCACAAGAGACAGATATTTTGAAACAATTAGAGTTGGTTGATTGGATCCAAAAACTAGGTCTTGCCAACCATTTTCAGAAGGAAATCAATGGCTTTCTTGAATCAATACTTGCCTATGTCAAAACCAGCAATGTTAATCTTAATACACAACAAGATCTGCACGTATCTGCATTATGCTTCAGGCTTCTCAGAAATCATGGATATGCAGTTTTGCCTGATACATTAGGCAAGTTCTTAGATAAAAATGGTAAAGTGAAGAGGAGAATGAGTGCAGATGGTGGAGATGTTAAAGATGTTGTGGAGCTTCTTGAGGCCTCACATTTAGGGTTGGAAGGAGAAAAGATATTGGATAAGGCAAAAACTTGTGCCATAAATTCTCTGAAGGATAGTTTTTGTTCCATCAACAAGGACCAACTTTCTGATACTGTAGATGATGAAAGAATGGACCACTCCCTGGAGCTTCCCTCCCATTGGAGAGTGCAGTGGTTTGAAGTGAAATGGCACGTGAAGCAATACAGCAAGGAGAAAAATATGAACCCCGTTTTACTTGAACTGTCTAAACTAAATTTCAATATGATTCAAGCAACACTTCAGCTGGAGCTCAAAGAATTATCGAGGTGGTGGGAGAATCTTGGCATAAAAGAAGAGTTGAGCTTTGCGAGGAACAGGTTGGTCGAAAGCTTCATGTGTGCAGCAGGAGTTGCTTCTGAGCCAAAGTACAGATCCATCAGAAAATGGCTCACTAAGGTTATAGTTTTCGTACTTGTCATTGATGATGCTTATGATATACATGCCTCGTTTCAAGAGTTGAAGCCCTTCACAATGGCATTTGAGAGATGGGAAGACACAGACACAGAACTTGAAGAACTTCCAACGTACATGAAAACATGCGTCCATGCACTAAAAGATGTCACAAACGAAATTGCTTATGAAATTGGTGGAGAAGATAACTTTCACTTGGTGTTACATTACCTAAAGAAAGCGTGGATAGAGTTTTTCAAAGCATTGTACGAGGAGGCAAAGTGGTACAACCAAGGATACATTCCATCGTTGCAAGAATATTTAAGCAATGCATGGATTTCATCTTCCGGGCCTGTGATTTTACTGCACTCATATCTTGGTACAGTGTATCAAGTAAATGATTCCATGGAACATTTTCTACACACGTACGAGGATTTGGTCTACAATGTGTCTCTTGTGATTAGACTTTGCAACGACTTAGGGACCATGGTGGCTGAAAGAGAAAGAGGTGATGCTGCTTCGTCAATCGTATGCTATATGAATGAAAAGGGTGTTTCAGAGGAGAAAGCAAGAAAGCATATCGGAGATAAAATCTTTGAAGCATGGAAGAAGATAAACGAAAAGTGTTTTGCTTCTTCTTCTTCTTGTTCTTGGATGGAACCATTTGTTACTCAAGCAATAAACGCAGCTCGTGTGGGTCATACCCTTTATCAAAATGGAGATGGTTTTGGAATCCAAGATCAAGACATCAAAAAACATATCTTGTCACTGGTTGTTGAACCTCTTTAA 1719 0.3915 MKQSHFNVSSQNFVSVTHNSRRSANYKPNIWKHHFLQSLHTKYHKEEFVMLLNKRVMEVKSVFAQETDILKQLELVDWIQKLGLANHFQKEINGFLESILAYVKTSNVNLNTQQDLHVSALCFRLLRNHGYAVLPDTLGKFLDKNGKVKRRMSADGGDVKDVVELLEASHLGLEGEKILDKAKTCAINSLKDSFCSINKDQLSDTVDDERMDHSLELPSHWRVQWFEVKWHVKQYSKEKNMNPVLLELSKLNFNMIQATLQLELKELSRWWENLGIKEELSFARNRLVESFMCAAGVASEPKYRSIRKWLTKVIVFVLVIDDAYDIHASFQELKPFTMAFERWEDTDTELEELPTYMKTCVHALKDVTNEIAYEIGGEDNFHLVLHYLKKAWIEFFKALYEEAKWYNQGYIPSLQEYLSNAWISSSGPVILLHSYLGTVYQVNDSMEHFLHTYEDLVYNVSLVIRLCNDLGTMVAERERGDAASSIVCYMNEKGVSEEKARKHIGDKIFEAWKKINEKCFASSSSCSWMEPFVTQAINAARVGHTLYQNGDGFGIQDQDIKKHILSLVVEPL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02904 572 FunFam Isoprene synthase, chloroplastic 216 562 - -
Viun11g02904 572 Pfam Terpene synthase family, metal binding domain 246 514 IPR005630 GO:0000287|GO:0010333|GO:0016829
Viun11g02904 572 CDD Terpene_cyclase_plant_C1 21 571 IPR044814 GO:0010333|GO:0016102
Viun11g02904 572 SFLD Terpene Cyclase Like 1 C Terminal Domain 241 571 IPR034741 -
Viun11g02904 572 Gene3D - 67 241 IPR036965 GO:0010333|GO:0016829
Viun11g02904 572 Gene3D Farnesyl Diphosphate Synthase 28 562 IPR008949 -
Viun11g02904 572 Pfam Terpene synthase, N-terminal domain 30 206 IPR001906 GO:0010333|GO:0016829
Viun11g02904 572 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 240 IPR008930 -
Viun11g02904 572 SFLD Isoprenoid Synthase Type I 241 571 - -
Viun11g02904 572 SUPERFAMILY Terpenoid synthases 241 572 IPR008949 -
Viun11g02904 572 PANTHER OS04G0344100 PROTEIN-RELATED 19 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02904 Viun-Chr11 40808467 40812668 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02904 K14173 - gmx:100812119 823.157