Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02860 ATGCATAACTTGCAAATTTGTGTGTTGAATTGTTTTTCTTCAATGGGGTCTCGTAATCGAATTCTCCTCAAACATGTTTCCATTTTACTGGTTTTTTTCCTTAGCCTTAGTTGCTGTTCGACCTCTGAAACTCTCACTCCCTCACTTCTGAACTTGGTGGTTTCTAACACCACACTGCTGCACCGCAATTTCACCGCACTGTCAGAATTCAGAATGATAAACAGACGAATTTTGAGCGATTGCTCTGCTTCAAATCCCTCCCTCAAAGTTAATGTCCTCTCAAATTCCACTCTATCGGATGAGGAGTTTGTGACAGTTACTGTCACAGGGGTTTCCAATCCTTCAGACGGTGATTGGGTTGCTATGATCTCACCTTCAAATTCTGATGTGAAATCTTGTGTGCTGAATGAGTTGTTCTATCTACAAACCGGTGATACGGCCAAACTTCCTCTGTTATGCCACTACCCTGTTAAGGCACAGTACATGAAAAATGATCCAAACTACCTCAGTTGCAAAAACAAAGAATGCAAGAAATACCAAGATGGGAAATGCGTTATCTCAACGTGCAGTGGTTCAATACAGTTTCATGTCATCAATATTAGAAGTGACATTGAGTTCGTGTTCTTCTCTGGTGGATTCCTGAAACCCTGCCTTGTGGGAAGGTCCACGCCCGTGAGTTTTGCTAATCCCAAGAGGCCACTCTATGGGCATCTATCAAGCATAGATTCAACCGGAGAATCAATGAGATTGACATGGGTTAGTGGAGACAAGGAGCCTCAGCAAATCCAATATGGAAATGGAGAAGCAGTTACTTCAACAGTCACCACATTTTCTCAAGCTGATATGTGTAGTTCAGCTCTGCCGAGTCCTGCTAAGGATTTTGGATGGCATGATCCGGGATACATCCATTCAGCACTTATGACAGGACTAAAGCCTTCAAGCCCCTTCTCCTACAAATATGGAAGTGACTCGGTTGGTTGGAGTAATCAAATCCAGTTTTCAACACCACCAGCTGGAGGATCGGATGAGCTCAGATTCATAGCATTTGGTGATATGGGCAAAACTCCTCTCGATGCTTCCAAAGAACACTACATTCAGCCCGGAGCTCTTTCAGTGATTAAAGCTATAGCCAAAGATGTAAATTCCAACAAAGTAAATTCAGTGTTTCACATCGGAGACATAAGCTATGCGACAGGTTTTCTAGCAGAATGGGATTTCTTCCTTCACCTTATCAATCCAGTAGCTTCCCGGGTTTCTTATATGACAGCAATAGGGAACCATGAGAGGGATTACGTAGATTCTGGTTCAGTATATATTACTCCTGACTCTGGTGGTGAATGTGGAGTACCTTATGAAACATATTTCCCAATGCCAACTTCAGCAAAAGATAAGCCTTGGTACTCTATTGAACAAGGAAGTGTTCATTTCACAGTAATATCAACTGAGCATGATTGGTCAGAAAATTCTGAGCAGTATGCATGGATGAAAAAGGACATGGCATCGGTTAATCGACAGAAAACTCCTTGGCTAATCTTCATGGGACATAGACCGATGTACACCTCTCACCCGGGATTGTTTTCATCTGAAAACAAATTTAATGAAGCTGTGGAGCCATTGCTATTTCAGAATAAGGTTGACTTGGCTCTTTTTGGCCATGTACATAATTATGAGAGAACTTGTTCCGTGTTTCAACATAAATGTAAAGCCATGCCTACAAAAGATAAAAATGGAGTGGATACATATGATGGCCGAAATTACAGTGCTCCTGTGCATGTTGTCATTGGCATGGCTGGCTTCACCTTGGACAACTTTTCAAGCAATGCGGAGAGCTGGAGCCTGAAAAGGATTACCGAATTTGGTTATCTAAGATCACATGCTACAACGAAGGACTTGAGCCTGGAGGTTAGTGCTTACTTGTTTGTCGTCTCAAATACAAAAGAAGTTATGGACAGTTTCCACATTACAAAGTGA 1971 0.4206 MHNLQICVLNCFSSMGSRNRILLKHVSILLVFFLSLSCCSTSETLTPSLLNLVVSNTTLLHRNFTALSEFRMINRRILSDCSASNPSLKVNVLSNSTLSDEEFVTVTVTGVSNPSDGDWVAMISPSNSDVKSCVLNELFYLQTGDTAKLPLLCHYPVKAQYMKNDPNYLSCKNKECKKYQDGKCVISTCSGSIQFHVINIRSDIEFVFFSGGFLKPCLVGRSTPVSFANPKRPLYGHLSSIDSTGESMRLTWVSGDKEPQQIQYGNGEAVTSTVTTFSQADMCSSALPSPAKDFGWHDPGYIHSALMTGLKPSSPFSYKYGSDSVGWSNQIQFSTPPAGGSDELRFIAFGDMGKTPLDASKEHYIQPGALSVIKAIAKDVNSNKVNSVFHIGDISYATGFLAEWDFFLHLINPVASRVSYMTAIGNHERDYVDSGSVYITPDSGGECGVPYETYFPMPTSAKDKPWYSIEQGSVHFTVISTEHDWSENSEQYAWMKKDMASVNRQKTPWLIFMGHRPMYTSHPGLFSSENKFNEAVEPLLFQNKVDLALFGHVHNYERTCSVFQHKCKAMPTKDKNGVDTYDGRNYSAPVHVVIGMAGFTLDNFSSNAESWSLKRITEFGYLRSHATTKDLSLEVSAYLFVVSNTKEVMDSFHITK 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02860 656 PANTHER PURPLE ACID PHOSPHATASE-RELATED 60 656 - -
Viun11g02860 656 Pfam Calcineurin-like phosphoesterase 344 556 IPR004843 GO:0016787
Viun11g02860 656 SUPERFAMILY Purple acid phosphatase, N-terminal domain 221 337 IPR008963 GO:0003993|GO:0046872
Viun11g02860 656 Gene3D - 233 339 - -
Viun11g02860 656 SUPERFAMILY Metallo-dependent phosphatases 343 634 IPR029052 -
Viun11g02860 656 Gene3D - 340 656 IPR029052 -
Viun11g02860 656 CDD MPP_PAPs 343 656 IPR041792 -
Viun11g02860 656 Pfam Fn3-like domain from Purple Acid Phosphatase 95 229 IPR040974 -
Viun11g02860 656 Pfam Purple acid Phosphatase, N-terminal domain 237 335 IPR015914 GO:0003993|GO:0046872
Viun11g02860 656 Pfam Iron/zinc purple acid phosphatase-like protein C 588 651 IPR025733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02860 Viun-Chr11 40568896 40577711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02860 102 654 Miscellaneous Gene Families AT2G03450 31.485 4.65e-70 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02860 K22390 - gmx:100802505 1113.6