Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02855 ATGGCGCTTAAAACCCTATCCACTACTTTCCTCTCACCTCTTTCTCTTTCCAAATCCAAATTTCCGCAACATTTACTCACCACCAAGCCTGGCCTCATTCTCTGCGAATTCTCGCGCTCTCAGAAATCGCGTTTGCCCGCCGACGAGTCGGAAGGCATCGGCGCCGCCGCTCCGTCGCCCGGCGAGAAGTTTCTCGAACGCCAACAGTCGTACGAAGCTGCCAAGCTCATCCTTAAAGAAAACAAGAAGAGGAAAAAGAAGAAAGATAACGCTGTAAAAGCTTCTCGAAACGTCGCTTCCTGCTACGGCTGCGGCGCTCCGTTGCACACTTCCGATGCCGTCGCCCCTGGCTACGTTGATCCTGAAACCTATGAATTGAAGAAGAAACACCACCAGCTTAGAACCGTTCTGTGTAGACGGTGCCAGCTTTTGTCGCACGGCGAGATGATAACTGCCGTCGGAGGACACGGAGGATACCCTGGCGGTAAATTATTCGTTACCGCTGAAGAGCTTCGAGAGAAGTTGTCTCACTTGCGTCACGAGAAAGCTCTTATTGTCAAACTGGTTGATATTGTTGACTTCAATGGCAGTTTTTTGTCTCGTGTTCGAGATCTTGCCGGTTCTAACCCAATTATACTGGTGGTAACTAAGGTTGATCTCCTTCCAAGAGATACTGATCTTAATTGTGTAGGGGATTGGGTTGTAGAGGCTACCATGAGAAAGAAGCTGAATGTTCTCAGTGTTCATCTCACCAGTTCCAAATCATTGGTTGGAGTAACCGGAGTGATATCAGAAATCCAGAAAGAGAAGAAGGGAAGGGATGTTTACATTCTGGGTTCAGCTAATGTTGGAAAATCCGCCTTCATCAATGCTTTACTAAAAACAATGGCTATAAATGATCCGGTGGCCGCATCTGCACAAAGATACAAACCAATACAATCTGCAGTTCCGGGAACTACCTTAGGGCCAATTCAAATTAATGCTTTTCTAGGAGGAGGGAAATTGTATGACACTCCTGGAGTTCATCTCCACCATAGGCAAACTGCAGTTGTTCAATCTGAAGATCTACCTTCCCTTGCTCCTCGGAGCCGACTGAGGGGAATTTCTTTCCCAAGGACTCCTGTGTCTGCGGACAATGTAGAGCAAGTAGCTTCCATAGAGAATGGCTTGAATGCATTTTCAGTTTTCTGGGGAGGTCTTGTTAGAATTGATTTGATGAAGGTTCTCCCAGAAACTTGTTTGACATTTTATGGGCCCAAGGGACTACAAATTCATATGGTACCCACAGAGCAAGCAGATGAGTTTTATCAGAAAGAACTTGGTGTTCTCTTGACTCCGCCAAGTGGAGGAGAAAATGTTGAGAGCTGGAAAGGACTTGAATCAGAACGTAAATTGCAAATAAAATTCGAAGATGTGGAAAGACCAGCTTGTGATATAGCTATATCAGGTCTAGGGTGGTTTACTGTGGAGCCATTTGGTAGGTCACACAAAATCTCTCAATCAAAACCTGTTGAGACTACTGGGGAATTGATTTTGGTCGTGCGAGTCCCCAAACCTGTTGAGATTTTTGTGAGGCCACCGATACCGGTAGGCAAGGCTGGAGCAGAGTGGTACCAGTATGTAGAATTAACAGAGAAAGAAGAGGAAATGAGACCGAAATGGTACTTTTGA 1671 0.4596 MALKTLSTTFLSPLSLSKSKFPQHLLTTKPGLILCEFSRSQKSRLPADESEGIGAAAPSPGEKFLERQQSYEAAKLILKENKKRKKKKDNAVKASRNVASCYGCGAPLHTSDAVAPGYVDPETYELKKKHHQLRTVLCRRCQLLSHGEMITAVGGHGGYPGGKLFVTAEELREKLSHLRHEKALIVKLVDIVDFNGSFLSRVRDLAGSNPIILVVTKVDLLPRDTDLNCVGDWVVEATMRKKLNVLSVHLTSSKSLVGVTGVISEIQKEKKGRDVYILGSANVGKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLHHRQTAVVQSEDLPSLAPRSRLRGISFPRTPVSADNVEQVASIENGLNAFSVFWGGLVRIDLMKVLPETCLTFYGPKGLQIHMVPTEQADEFYQKELGVLLTPPSGGENVESWKGLESERKLQIKFEDVERPACDIAISGLGWFTVEPFGRSHKISQSKPVETTGELILVVRVPKPVEIFVRPPIPVGKAGAEWYQYVELTEKEEEMRPKWYF 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02855 556 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 40 556 IPR044229 GO:0003924
Viun11g02855 556 Gene3D - 169 345 IPR027417 -
Viun11g02855 556 CDD YqeH 138 341 - -
Viun11g02855 556 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 345 IPR027417 -
Viun11g02855 556 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 168 344 IPR030378 GO:0005525
Viun11g02855 556 Pfam 50S ribosome-binding GTPase 275 345 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02855 Viun-Chr11 40536287 40541905 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02855 K13427 - gmx:100781340 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02855 11 40536287 40541905 Viun11g02855 11 40536287 40541905 ECH