Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02848 ATGGACGCGCAGAGAGCTTTGCTCGACGAACTCATGGGTGCAGCGCGCAACTTGACGGAGGAAGAGAGAAAGGGGTACAAGGAAGTTACTTGGGACGACAAGGAAGTGTGTGGATTCTACATGGTGCGCTTTTGCCCTCACGATCTCTTCGTCAACACGCGCAGTGATCTCGGTGCTTGCCCAAGAATTCACGACCCAAAATTGAAAGAAAGTTTTGAGAAGTCTCCAAGACATGATGCATATGTACCCAAATTTGAAGCCGAACTTGCTCAATTTTGTGAGAAATTGGTGATGGACTTAGATAGAAGAGTAAGACGGGGACGAGAGCGCCTTGCTCAAGAGGTGGAGCCAGCACCACCCCCACCTCTGACAGCTGAAAAATCTGAGCAGTTATCTGTTGTGGAGGAGAAAATAAAGAACCTTCTTGAACAAGTTGAATCTCTTGGCGAAGCTGGGAAAGTTGATGAAGCTGAAGCTCTTATGAGGAAGGTGGAGACACTTAATGCTGAGAAGACAGCTTTATCACAACCTCAAAATGATAAGGTGTTGATGCTTGGTCAGGAGAAGAAGATGGCACTATGTGAAATTTGTGGTTCTTTTCTTGTGGCAAATGATGCTGCAGAAAGGACACAGTCACACGTCACAGGGAAGCAGCATGTTGGTTATGGCATGGTTCGTGACTTCATAACTGAGTATAAGGCCGCAAAGGAGAAAGCTAATGACGAGGAAAAGTTAGCCAGGGAAAAAGAGGCCGAAGAGCGGAGGAAACAAAGGGAGAAGGAGCATGAGAGGAGGAGACGAAGTGATTCAAGTGATAGGGATAGACATCGTGATAAAGACCATAATAGGGAGCGGGACAGATATAGGGACAGAGACTCGGAGCGTGAAAGGTCTAGGGAGCATGATGTTAGAGGCTACCGAGACGGGGGAAGGGGAGTAGATTATAGGTTGAGGAATGGACGAAATGGAGGTAGAGACAGGTACCGTGATAGGAGCAGATCACGTTCTCCTGTTAAGCATAGCTACAGAAGATCTTCTTGA 1041 0.4717 MDAQRALLDELMGAARNLTEEERKGYKEVTWDDKEVCGFYMVRFCPHDLFVNTRSDLGACPRIHDPKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLAQEVEPAPPPPLTAEKSEQLSVVEEKIKNLLEQVESLGEAGKVDEAEALMRKVETLNAEKTALSQPQNDKVLMLGQEKKMALCEICGSFLVANDAAERTQSHVTGKQHVGYGMVRDFITEYKAAKEKANDEEKLAREKEAEERRKQREKEHERRRRSDSSDRDRHRDKDHNRERDRYRDRDSERERSREHDVRGYRDGGRGVDYRLRNGRNGGRDRYRDRSRSRSPVKHSYRRSS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02848 346 MobiDBLite consensus disorder prediction 236 346 - -
Viun11g02848 346 Coils Coil 1 21 - -
Viun11g02848 346 MobiDBLite consensus disorder prediction 236 335 - -
Viun11g02848 346 Coils Coil 124 151 - -
Viun11g02848 346 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 334 IPR004882 GO:0003729|GO:0005685|GO:0006376
Viun11g02848 346 Coils Coil 229 266 - -
Viun11g02848 346 Pfam LUC7 N_terminus 2 249 IPR004882 GO:0003729|GO:0005685|GO:0006376
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02848 Viun-Chr11 40519445 40523330 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02848 - - gmx:100792348 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02848 11 40519445 40523330 Viun11g02848 11 40519445 40523330 ECH