Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02806 ATGCCTCTCTCTCTTCTTCCCATCTATTCTTCACCTCACCTCTCCCCCTCTCTCTTCTTTCCTACACCACACCTTTCTTTCCTTTGTCTCCCAAAACTCTCAAATGCCCCAACTCCCCAATTTATCTTATGCTGCCGAAGGAACGCTTCTTTTTCCGCCCGATGTGGGCCTGGAGTCCCCGATGGTGCACAACATGGAAGTGGTATTGAAGAAGATGATGAACAACAACCCATGAAGGCTAGTTGCGATGACGACGAAGAAGAAGAAGGCCAAGAGAGTCTTAGCTCCTTAGAATTGCCTGAAAGATGGGATGTCTTGGGTCTCGGTCAAGCCATGGTGGACTTCTCTGGCATGGTTGATGATGATTTTCTGAAGAAGTTGGGGTTAGAGAAGGGAACGCGGAAAGTGGTAAATCACGAGGAAAGAGGTAGAGTTTTGCAGGCTATGGATGGGTGCAGCTATAAAGCTGCGGCTGGTGGATCTCTTTCTAATACCCTAGTTGCTCTTGCAAGGCTTGGAAGTCGTTCGCTCAAAGTTCCTGCTATAAGTGTGGCAATGACCGGTAGTGTAGGGAGTGATCTGTTGGGGGGTTTCTACAGGGAAAAATTGCGCCGAGCAAATGTGCAATTTCTTTCCGAGCCTATCAAAGATGGAACAACTGGAACAGTTATAGTTCTCACAACTCCAGATGCTCAGCGAACAATGCTTGCATATCAGGGCACATCTTCAACTGTTAACTATGATGCATCCTTGGCTAGTGCTGTTTCCAAGACCAACATACTGATTGTTGAAGGGTATTTATTTGAACTTCCTGATACTATTAAAACAATAACCAAAGCATGTGAAAAAGCTCGAAGCAATGGTGCCTTGGTTGCAATAACAGCTTCAGATGTTTCCTGCATTGAAAGACACTTTGATGATTTTTGGGAAATCATTGGGAACAGTGTGGATTTAGTGTTTGCAAATGGTGATGAGGCCAGAGCTCTTTGTAATTTTGAAGCAAAGGAAAGTGCTGCTTCAGCTGCAAGGTATCTGAGCCACTTTGTTCCTCTAGTATCTGTTACAGATGGTCCTAGAGGGTCTTACATAGGTGTAAAAGGAGAAGCTGTATATATTCCTCCTTCTCCATGTGTTCCAGTGGATACTTGTGGTGCTGGTGATGCATATGCATCTGGTATACTATATGGTATTTTAAGAGGTATATCAGATTTGAGAGGTATAGGCACATTAGCAGCAAATGTTGCTGCTACTGTTGTTGGACAACAGGGAACACGCCTTAGAATTTCAGATGCAGTCAAATTGGCTGAGTCTTTTCAATTTCAACTTGATTCCTCTTCGGTTGGCACTGATCATATTTCCAGTGTATAA 1368 0.4408 MPLSLLPIYSSPHLSPSLFFPTPHLSFLCLPKLSNAPTPQFILCCRRNASFSARCGPGVPDGAQHGSGIEEDDEQQPMKASCDDDEEEEGQESLSSLELPERWDVLGLGQAMVDFSGMVDDDFLKKLGLEKGTRKVVNHEERGRVLQAMDGCSYKAAAGGSLSNTLVALARLGSRSLKVPAISVAMTGSVGSDLLGGFYREKLRRANVQFLSEPIKDGTTGTVIVLTTPDAQRTMLAYQGTSSTVNYDASLASAVSKTNILIVEGYLFELPDTIKTITKACEKARSNGALVAITASDVSCIERHFDDFWEIIGNSVDLVFANGDEARALCNFEAKESAASAARYLSHFVPLVSVTDGPRGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGISDLRGIGTLAANVAATVVGQQGTRLRISDAVKLAESFQFQLDSSSVGTDHISSV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02806 455 SUPERFAMILY Ribokinase-like 103 426 IPR029056 -
Viun11g02806 455 FunFam Putative sugar kinase slr0537 106 430 - -
Viun11g02806 455 CDD adenosine_kinase 102 427 - -
Viun11g02806 455 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 381 394 IPR002173 GO:0016301
Viun11g02806 455 PANTHER SUGAR KINASE 96 436 - -
Viun11g02806 455 Gene3D - 112 238 - -
Viun11g02806 455 Gene3D - 106 423 IPR029056 -
Viun11g02806 455 MobiDBLite consensus disorder prediction 77 94 - -
Viun11g02806 455 MobiDBLite consensus disorder prediction 60 96 - -
Viun11g02806 455 Pfam pfkB family carbohydrate kinase 154 426 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02806 Viun-Chr11 40307257 40310490 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02806 - - gmx:100816996 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02806 11 40307257 40310490 Viun11g02806 11 40307257 40310490 ECH