Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02798 ATGGCTTCAAAATCTAGACCCAATCTATCTGAAAATCCCAGCAAGGGATCAATGGTGACTACTAGAATCAGTAAAGGTAGCAAAGTAGTGTCCAAATCAGAATCCGAGTCACAATCCCCTTTGCAAAATTCGCGACTTTCTGTGGAACGATCTCCACGATCTGTTAATTCAAAGCCAACGATTGAGCGCAAATCACCAAGACCTTCCGCCACACCACCTGATAAGCAACCCCCTAGAGCTGCAAAGGGTTCAGAGTTGCAGAACCAGTTGAATCTTGCTCAGGAAGACCTAAAGAAAGCAAAGGAGCTTCTCATTCTGGCTGAGAAGGAGAAGCTAAAAGCAATTGATGAGTTGAAAGAAGCACAGAGAGTGGCTGAGGAAGCAAATGGCAAACTCAGGGAAGCATTGGTGGCTCAAAAACGTGCAGAGGAGAATTCTGAGATTGAGAGGTTCCGAGCTGTGGAATTGGAGCAGGCTGGTATTGAAACTGTGAAGAAGAAGGAAGAAGAATGGAAGAACGAGATTGAAAGTGTAAGGAACCAACATGCTTTGGATATGGCTGCTCTTCTCTCCACCACGCAGGAGCTTCAGCGGGTTAAACACGAACTTGCCATGACTTGTGATGCAAAGAACCAGGCATTGAATCATGCCGATGATGCAACTAAAATTGCCGAGATTCAGGCAGAGAAAGCAGAGTTTTTATCAGCTGAATTGTTGCGATTGAAGGCCTTACTGGATGCAAAACTGGAAACACAAGCTGGTGAGAATCAGGTTATATCGAAACTGAAAGCCGAGATAGAGGCTCTCAATGAAGAACTTGAAAAAGCAAAGGGTTACGCTGATAAGTTGTCAGAGAAAGAAAGTTTTATTGAACAGCTTAATGTGGAGCTTGAAGCTTCAAAAATGGCTGAATCTTATTGCCGAAGCCTGCTAGAGGAGTGGCATAAGAAGGTTGAGGAACTGGAAATGAGAATTGAAGAAGCAAACAGACTGGAGAAATCTGCATCAGAGTCTTTGGAATCCGTGATGAAACAGCTAGAAGGAAGCAATGATTTGTTGCACGAAGCCGAATCTGAAGTTACTACTCTTAAAGAGAAGGTGGGGTTATTAGAAATGACAATTGGGAGACAGAGAACTGATGTTGAGGATTCAGAACGCCAACTTCGTACGGCCAAGGAAGAAAGTGTTGAGAAATCAAAGGAAGTTGAGGCTCTGAAATCTGAAATTGAGAAGGTTAAGGAAGAGAAAGCTCAGGCTTTGGACGATGAAAAACTTGCTGCTTCTAGTGTGCAGAGCTTATTAGAAGAGAAAAACAAACTCATCAGTGAACTGGAAAATTCTAGGGATGAAGAAGAAAAGAGTAAAAAGGCAATGGAAAGCTTAGCTTCCGCATTACATGAAGTATCTGCAGAAGCCAGAGAAGCCAAGGAAAATCTACTAAACATCCAAGCTGAACGTGAAAGCTATGAGGCTCAGATTGAAGATTTGAAGTTAGTATTAAAAGCCACTAATGAAAAATACGAGTCCATGCTTGATGAGGCACGGCACGAGATCGATGTTCTTGTATGCAGCATTGAAAATTCCAAGAGTGTGTTTGAGAACTCCAAGGTTGAGTGGGAGCAGAGAGAGCATCATCTAGTAAGCTGCATAAAGAAAAATGAAGAAGAGAAGGTATCTCTGGAAAAAGAAATAAAAAGATTGCTTTATCTGCTTAAAGAAACCGAGGAAGAAGCTAATATCAACAGGGAGGAAGAAGCTCAGTTGAAGGAAAATCTGAAGGAAGTTGAGACTGAGGCAATTCAACTGCAGGAAGCTCTGAAGGAAGCGACGGCTGAGAACATGAAATTGAAGGAGAATTTATTGGATAAAGAAAATGAGTTGCAGAGTATGTTTGAAGAAAATGATGAACTTCGGGTAAGGGAATCTGAATCTATCAAGAAAGTGGAGGAGTTATCTAAGTTGTTGGAAGAAGCTACAACCATAAACCACACAGAGGAAAATGGGGATGTTAGTGACAGTGAAAAAGACTATGATTTGCTTCCCAAAGTAGTTGAATTTTCCGAAGAGAATGGACATGTAGGAGAGGAGATTTCAAAGGTAGAAAGCATTCTCTCAGAGAATCAAAAGGAACTGAAACAAAACATACCAGAAGAAAGCATCGACAAGGCTGAAAATATTGCATCTCCGAAACCTGAGGAAGTGAGTGAAAAACTGAAGGAAGAAGAAGAAGATGAGAGGAAAGAAAAGGAGGATTCAGTAGAAGTTGAATTTAAAATGTGGGAGAGCTGCAAAATAGAGAAAAAGGAGTTCTCTCCAGAGAGAGAAGCAGAACCAGAATCATTTGAAGAGGAAGTTGAGTCAAAGGTAGAAGAAGGTGGTGAGAGTTTTGATAAGATAAATGGAAATGCAGTGACAGAGAACATTGATGAAGGTGGTGGGAGTCCACCACCAAAACAACAACAACAGCAACAACAATTGAAGAAGAAGAAAAAGCCTTTACTTGGCAAGTTTGGGAGCCTGCTAAAGAAAAAGGGTGGTGGTGGGAACCAGAAATAG 2556 0.4159 MASKSRPNLSENPSKGSMVTTRISKGSKVVSKSESESQSPLQNSRLSVERSPRSVNSKPTIERKSPRPSATPPDKQPPRAAKGSELQNQLNLAQEDLKKAKELLILAEKEKLKAIDELKEAQRVAEEANGKLREALVAQKRAEENSEIERFRAVELEQAGIETVKKKEEEWKNEIESVRNQHALDMAALLSTTQELQRVKHELAMTCDAKNQALNHADDATKIAEIQAEKAEFLSAELLRLKALLDAKLETQAGENQVISKLKAEIEALNEELEKAKGYADKLSEKESFIEQLNVELEASKMAESYCRSLLEEWHKKVEELEMRIEEANRLEKSASESLESVMKQLEGSNDLLHEAESEVTTLKEKVGLLEMTIGRQRTDVEDSERQLRTAKEESVEKSKEVEALKSEIEKVKEEKAQALDDEKLAASSVQSLLEEKNKLISELENSRDEEEKSKKAMESLASALHEVSAEAREAKENLLNIQAERESYEAQIEDLKLVLKATNEKYESMLDEARHEIDVLVCSIENSKSVFENSKVEWEQREHHLVSCIKKNEEEKVSLEKEIKRLLYLLKETEEEANINREEEAQLKENLKEVETEAIQLQEALKEATAENMKLKENLLDKENELQSMFEENDELRVRESESIKKVEELSKLLEEATTINHTEENGDVSDSEKDYDLLPKVVEFSEENGHVGEEISKVESILSENQKELKQNIPEESIDKAENIASPKPEEVSEKLKEEEEDERKEKEDSVEVEFKMWESCKIEKKEFSPEREAEPESFEEEVESKVEEGGESFDKINGNAVTENIDEGGGSPPPKQQQQQQQLKKKKKPLLGKFGSLLKKKGGGGNQK 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02798 851 MobiDBLite consensus disorder prediction 710 754 - -
Viun11g02798 851 Coils Coil 550 640 - -
Viun11g02798 851 MobiDBLite consensus disorder prediction 1 64 - -
Viun11g02798 851 MobiDBLite consensus disorder prediction 1 93 - -
Viun11g02798 851 MobiDBLite consensus disorder prediction 766 851 - -
Viun11g02798 851 Coils Coil 311 422 - -
Viun11g02798 851 Coils Coil 732 752 - -
Viun11g02798 851 MobiDBLite consensus disorder prediction 814 828 - -
Viun11g02798 851 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 19 845 - -
Viun11g02798 851 Coils Coil 427 517 - -
Viun11g02798 851 Coils Coil 83 145 - -
Viun11g02798 851 Coils Coil 252 286 - -
Viun11g02798 851 Coils Coil 161 181 - -
Viun11g02798 851 MobiDBLite consensus disorder prediction 776 790 - -
Viun11g02798 851 MobiDBLite consensus disorder prediction 378 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02798 Viun-Chr11 40282222 40286175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02798 - - gmx:100777446 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02798 11 40282222 40286175 Viun11g02798 11 40282222 40286175 ECH