Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02794 ATGAGATCGGTGAAAGTGAGTAACATCTCTTCAGGTGCAACCGAGCAAGATTTGAGGGAATTTCTTACCTTTCCTGGAAAAATTGAACATGTTGAAATGCAAAGTGACAAGGGAAGTTCCAAAGTTGCGTATGTCACCTTCAGTACTCCAGAGGGAGCAGAAACTGCAGTTCTTCTCTCGGGAGCAGTTGTGTGTGGACAGTCTCTGAACATTGAATTGGCTAACGATTATCCTCTGCCTTCATCGACTGAATCTCCAATTGGTAACGCTGAAAGTGGGGAATCTGGTATGAGAAAGGCAGAGGATGTTGTAAGCACCATGTTAGCCAAGGGCTTCATTTTGGGTAAAGATGCATTGTATCGAGCAAAATCCTTTGATGAAAGGCACCGACTTACTTCCACGGCTTCAGCAAAAGTTGCTTCTTTGGACCAGAAGGTGGGATTTACTGAAAAGATCAGTGCTGGTACAGTTATAGTGAATGACAAGGTGAAAGAAATGGATGAGAAATTTCAAGTCTCAGAGAAGACTAAAACTGCAATTTCAGCAGCTGAGCAGTCGGTGTCCAGTGCTGGATCTGCTATAATGAAGAATCGGTATGTGTTGACTGGGGCTACATGGGTCACAGGTGCTTACAACAGGGTTGCAAAGAAAGCAGAGGAAGTGGGACAGAAAACTAAGGAGAAGGTTTTGGCGCAGAATAATCAAGGAACCACCATGTCGGAGGAACCCACCACACCTGATCAAACCTCTAAACAGGCAACCACAGTCAATGAACCCTCAAAACCTGAACCTCAACAGGCCACCACAGTTGATCAACCCTCAAAATCTGAAACTCAGCAGGTCACCACAGTTAATGAACCCTCCAAACCTGAACCTCAAGTGGTCACCACAGTTAACGAACCCTCCAAACCTGAAGCTCAACAGGCAACCAAGGATGGTCAATCTGCCAGTCCAGCAAAATCTACTGCCTGA 972 0.4547 MRSVKVSNISSGATEQDLREFLTFPGKIEHVEMQSDKGSSKVAYVTFSTPEGAETAVLLSGAVVCGQSLNIELANDYPLPSSTESPIGNAESGESGMRKAEDVVSTMLAKGFILGKDALYRAKSFDERHRLTSTASAKVASLDQKVGFTEKISAGTVIVNDKVKEMDEKFQVSEKTKTAISAAEQSVSSAGSAIMKNRYVLTGATWVTGAYNRVAKKAEEVGQKTKEKVLAQNNQGTTMSEEPTTPDQTSKQATTVNEPSKPEPQQATTVDQPSKSETQQVTTVNEPSKPEPQVVTTVNEPSKPEAQQATKDGQSASPAKSTA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02794 323 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 2 232 - -
Viun11g02794 323 SUPERFAMILY RNA-binding domain, RBD 2 84 IPR035979 GO:0003676
Viun11g02794 323 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 76 IPR000504 GO:0003723
Viun11g02794 323 MobiDBLite consensus disorder prediction 221 323 - -
Viun11g02794 323 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 68 IPR000504 GO:0003723
Viun11g02794 323 SMART rrm1_1 3 72 IPR000504 GO:0003723
Viun11g02794 323 MobiDBLite consensus disorder prediction 227 323 - -
Viun11g02794 323 Gene3D - 1 78 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02794 Viun-Chr11 40256466 40258802 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02794 - - vum:124839032 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02794 11 40256466 40258802 Viun11g02794 11 40256466 40258802 ECH