Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02789 ATGAGTGAAAATCTGATGGGAAGAGTGAACGCTTTGGGGGAGCGTCTGAAAATCGGTGGAGCCGAAGTGGGTCGGAAGATGAGTGCTGGAATGAGTTCTGTGAGCTTCAAAGTGAAAGAGTTTTTCCAGGATTCAACCCATGCTGATAAGCTCGTTGGGGAAGCTACCTCTGAGACCCTTCACCACCCTCACTGGCCCATCATTCTTCATCTCTGTGACTTGGTCAATGGTGATCAACTTAACACTGCTGAAGTGGTGCGTGCAATAAAGAAGAGGGTTGTTTCCAAGAGTCATAGAACTCAGTATCTGGCTCTGGTTCTGCTTGAAGCACTGGTCAAGAACTGTGACAAGGCTTTCTTGGAGGTGGCAACTGAGAGAGTCCTTGATGAGATGGTGAAGCTCGTTGATGACCCTTGCACTTTTGTTCATACCAGGAACAAGGCTTTGATGATGATTGAGGCATGGGGAGAGTCCACCATTGAACTTCGCTATCTTCCTGTCTATTCACAAACTTACAAGAGTTTGAAATCAAGGGGGATTCGATTCCCTGGTCGTGACAACGAAAGTTTGGCTCCAATTTTCACTCCACCTCGTTCTGGCACTGCTCCAGAGGCAGATGTGAGTCTTGAACATCTTATGCAGCACAATGTACGAAGTTTTTCGCCTGTTGCTCCTTCTCGTTCCGCCACTACTTCAGGGAGTGATGTCAGTCTTGCAAATCTGATGCACCATGAAGTTCATGTCAAAAATCTTACTTCTCAACAAACAGAGGAAGCTTTTGATGTTGCGAGAAACAGCTTTGAGCTTCTTTCTACTGTCTTATCTTCTTCAACGCAGAAGGACGTTGTAAAGGATGATTTGGTTACGACATTAGTACAACAGTGCCGACAGTCCCAGATTACTGTCCATAGAATCATTGAGACTTCATGGGACAATGAAGCGCTGCTTTGTGAGGCCTTGAACATAAATGATGAGATTCAGAAGGTTTTGAAGAGATATGAAGAAATGATGAAGAAGAAGAAGAAGCATGAACCTGAAGGTGATGAGGCACCACATTTTAGAGAAGAGAAAGCCCTGGTTAGAAGAAGTGGAAGTTCAAGAAGTGGAAACAGAGGAAACCAGGATGACATGTTGGATGATCTTGATGAGATGATATTTGGGAAAAGGGGTGGTTTTGATGAAGAACAATATCCAAAGAAACAACATTCATCAACAAAAGATGATCTCATCTCCTTCTAA 1239 0.4407 MSENLMGRVNALGERLKIGGAEVGRKMSAGMSSVSFKVKEFFQDSTHADKLVGEATSETLHHPHWPIILHLCDLVNGDQLNTAEVVRAIKKRVVSKSHRTQYLALVLLEALVKNCDKAFLEVATERVLDEMVKLVDDPCTFVHTRNKALMMIEAWGESTIELRYLPVYSQTYKSLKSRGIRFPGRDNESLAPIFTPPRSGTAPEADVSLEHLMQHNVRSFSPVAPSRSATTSGSDVSLANLMHHEVHVKNLTSQQTEEAFDVARNSFELLSTVLSSSTQKDVVKDDLVTTLVQQCRQSQITVHRIIETSWDNEALLCEALNINDEIQKVLKRYEEMMKKKKKHEPEGDEAPHFREEKALVRRSGSSRSGNRGNQDDMLDDLDEMIFGKRGGFDEEQYPKKQHSSTKDDLISF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02789 412 MobiDBLite consensus disorder prediction 340 362 - -
Viun11g02789 412 SUPERFAMILY GAT-like domain 180 339 - -
Viun11g02789 412 Gene3D - 237 340 IPR038425 -
Viun11g02789 412 SMART VHS_2 48 179 IPR002014 GO:0035091|GO:0043130
Viun11g02789 412 Gene3D - 39 200 IPR008942 -
Viun11g02789 412 ProSiteProfiles GAT domain profile. 251 338 IPR004152 GO:0035091|GO:0043130
Viun11g02789 412 SUPERFAMILY ENTH/VHS domain 44 183 IPR008942 -
Viun11g02789 412 PANTHER TOM1-LIKE PROTEIN 1 1 412 IPR044836 GO:0035091|GO:0043130|GO:0043328
Viun11g02789 412 MobiDBLite consensus disorder prediction 373 412 - -
Viun11g02789 412 ProSiteProfiles VHS domain profile. 55 183 IPR002014 GO:0035091|GO:0043130
Viun11g02789 412 Pfam VHS domain 47 179 IPR002014 GO:0035091|GO:0043130
Viun11g02789 412 CDD VHS 48 177 - -
Viun11g02789 412 MobiDBLite consensus disorder prediction 340 412 - -
Viun11g02789 412 Pfam GAT domain 264 338 IPR004152 GO:0035091|GO:0043130
Viun11g02789 412 Coils Coil 319 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02789 Viun-Chr11 40249143 40251011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02789 - - gmx:100784925 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02789 11 40249143 40251011 Viun11g02789 11 40249143 40251011 ECH