Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02773 ATGGCATCCGATCCTGAACAACCCTCTTTCGCAAAGGAAGGAAATTCGTCTGGTGAGGTTGCGAGTGCGAGGGAGCCTTTGCTTGTTGGGGTTCATGACTCCGAGAGCTATTCTGTCTCTGCTGCAATTCTTCCGTTTCTCTTCCCAGCTCTTGGTGGCCTACTATTTGGCTATGATATTGGTGCCACTTCTTCTGCAACCATATCCATTCAGTCATCGACGCTAAGTGGAATATCTTGGTACAACTTGTCCTCCGTTGAAATTGGTCTACTGACTAGTGGATCATTATATGGCGCCTTAATTGGCTCAGTGTTGGCCTTCAATGTTGCTGACTTCTTAGGAAGAAGAAGGGAACTCATTTTAGCTGCATTACTGTATTTTATTGGAGCTCTTGTAACAGCATTCGCTCCTGATTTTCCTGTGTTGGTGCTTGGGAGACTTATATTTGGCACTGGAATTGGACTGGCAATGCATGCTGCTCCAATGTACATTGCAGAGACAGCTCCAACACCAATACGTGGACAACTAATATCTCTGAAAGAGTTTTTTATAGTACTTGGGATGGTGGCAGGATATGGAATTGGAAGCTTGTTTGTAGTTACTGTATCTGGGTGGCGGTATATGTATGGAGTTAGTAGTCCTATAGCAATCATCATGGGACTTGGAATGTGGTGGCTACCAGTTTCTCCTAGATGGTTACTTTTGCGTGCTATTCAGGGAAAAGGGGATGTTCAGAATTCGAAAGACATAGCAATTCGTAGTTTGTGCCAGCTTCGAGGCCAGGCTAGTGGTGATTCAGCTCATCGCCAAGTTGATGAGATTCTTGCAGAACTTTCTTATCTAGGTGAAGAAAAGGAAGTTACCTTCGGAGAAATATTCCAAGGAAAATGCTTGAAAGCCCTTTGGATTGGTGCAGGATTGGTCTTGTTTCAGCAGATCACAGGGCAACCAAGTGTGCTCTACTATGCTGCATCAATCTTTCAGAGTGCAGGATTTTCCGGAGCATCTGATGCAACCCGAGTCTCTATTCTCCTTGGAGCTTTTAAGTTGATTATGACCGGTGTCGCAGTTGTAGTTGTTGATAAACTTGGAAGGAGGCCTTTACTTCTAGGAGGAGTTTCAGGAATAGTGATATCTTTATTCCTTCTGGGTTCATACTACGTTTTCTTGGATAACTCACCAGTTATTGCTGTAGTTGGTCTGCTGTTGTATGTAGGCTGTTACCAGATTTCCTTTGGTCCAATTGGTTGGCTCATGATAGCAGAGATTTTCCCCTTACGCCTAAGAGGACGAGGACTTGGTATAGCAGTACTCGTCAATTTTGGTGCAAATGCCCTTGTCACATTTGCTTTTTCACCATTGAAGGAATTACTGGGAGCAGGAATCTTGTTCTACATCTTTTGTGTAATAGCTGTGGCATCTCTTGCATTCATATACCTTATTGTACCAGAAACAAAGGGGCTTACACTGGAGGAGATAGAAGCCAAATGCCTCTAA 1497 0.4382 MASDPEQPSFAKEGNSSGEVASAREPLLVGVHDSESYSVSAAILPFLFPALGGLLFGYDIGATSSATISIQSSTLSGISWYNLSSVEIGLLTSGSLYGALIGSVLAFNVADFLGRRRELILAALLYFIGALVTAFAPDFPVLVLGRLIFGTGIGLAMHAAPMYIAETAPTPIRGQLISLKEFFIVLGMVAGYGIGSLFVVTVSGWRYMYGVSSPIAIIMGLGMWWLPVSPRWLLLRAIQGKGDVQNSKDIAIRSLCQLRGQASGDSAHRQVDEILAELSYLGEEKEVTFGEIFQGKCLKALWIGAGLVLFQQITGQPSVLYYAASIFQSAGFSGASDATRVSILLGAFKLIMTGVAVVVVDKLGRRPLLLGGVSGIVISLFLLGSYYVFLDNSPVIAVVGLLLYVGCYQISFGPIGWLMIAEIFPLRLRGRGLGIAVLVNFGANALVTFAFSPLKELLGAGILFYIFCVIAVASLAFIYLIVPETKGLTLEEIEAKCL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02773 498 Gene3D MFS general substrate transporter like domains 36 496 IPR036259 -
Viun11g02773 498 PRINTS Sugar transporter signature 311 321 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun11g02773 498 PRINTS Sugar transporter signature 421 433 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun11g02773 498 PRINTS Sugar transporter signature 53 63 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun11g02773 498 PRINTS Sugar transporter signature 143 162 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun11g02773 498 PRINTS Sugar transporter signature 398 419 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun11g02773 498 CDD MFS_GLUT10_12_Class3_like 48 493 - -
Viun11g02773 498 ProSitePatterns Sugar transport proteins signature 1. 356 372 IPR005829 GO:0016020|GO:0022857|GO:0055085
Viun11g02773 498 ProSitePatterns Sugar transport proteins signature 1. 106 123 IPR005829 GO:0016020|GO:0022857|GO:0055085
Viun11g02773 498 SUPERFAMILY MFS general substrate transporter 46 494 IPR036259 -
Viun11g02773 498 ProSiteProfiles Major facilitator superfamily (MFS) profile. 45 486 IPR020846 GO:0022857
Viun11g02773 498 NCBIfam sugar porter family MFS transporter 33 493 IPR003663 GO:0016020|GO:0022857|GO:0055085
Viun11g02773 498 Pfam Sugar (and other) transporter 48 495 IPR005828 GO:0016020|GO:0022857|GO:0055085
Viun11g02773 498 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 40 497 - -
Viun11g02773 498 FunFam D-xylose-proton symporter-like 3, chloroplastic 38 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02773 Viun-Chr11 40163835 40168539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02773 1 498 Organic Solute Cotransporters AT5G17010 76.143 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02773 - - gmx:100801856 866.3