Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02729 ATGGGGAGAGTGGTGGTGGGAGTAGCGGTGGGTTTGGCGACGGTGGCGTGTGCGGTGGCGGCGGTGGTGGTTGGAGGGAGAATGAGGAGCAGGGGGAAGTGGAAGAGAGTGGTGAGAGTGTTGAGGGAGGTTGAGGAAGGGTGTGAGAGTTCTGTTGAGAGGCTGAGGCAAGTGGTGGATGCTATGGCTGTTGAGATGCACGCAGGGTTGGCTTCAGAAGGTGGTTCAAAGCTCAAAATGCTTCTCACCTATGTTCATAATCTCCCTGATGGGACTGAGAAAGGGACATATTATGCACTACATCTTGGGGGTACAAATTTTAGGGTTTTGCGGGTTCATTTACACGATCAGCAATCTTCTGTTTTGGAACATGAAGTAGAGCGACAAGCCATCCCTCAACATCTAATGACCAGCACAAGCAAGGATCTCTTTGATTTCATTGCTTCTTCTTTAAAGGAATTCATCGAGAAAGAAGGAGACGGTTCTGAGCTTTCACTGGACAGAAGAAGGGAACTTGGATTCACATTTTCTTTCCCTGTGAAACAAACGTCAGTTTCTTCAGGCATTTTAATTAAATGGACAAAAGGGTTTTCCATTGTAGATATGGTAGGAGTAGATGTTCCTGCTTGTTTGCAGGAAGCATTGATACGAAAGGGACTAGACATGAGGGTAGCTGCCTTGGTAAATGATACTGTGGGAACACTGGCTCTTGGACATTATCATGACTCAGATACAGTTGCTTCCATAATAATTGGCACCGGTACCAATGCTTGCTATTTGGAACGGGTTGATGCTATTATAAAGTGTCAAGGTCTTCTTACATCATCAGGATACATGGTTGTAAATATGGAATGGGGAAACTTTTGGTCATCTCATTTACCAAGAACATCATATGATATTGATTTAGACTCCGAAAGCCCTAATCCAAATGATCAGGGTTTTGAGAAAATGATATCAGGCATGTATCTTGGTGACATTGTGAGGAGAGTCATTTTAAGGATGTCGCTAGACTCAGATATGTTTGGACCTGTTTCTTCCAAGCTTTCTACGCCCTTTACGCTGAGGACTCCTATGATGGCTGCCATGCACGAGGATGATTCTTCTGACTTGAGAGAAGTAGCAAGAATCCTCAGAGACATCCTTGAGATTCCTGATGCTCCTTTGAAGTTAAGAAAAGTTGTGGTGAAGGCTTGCGATGTGGTGACTCGCAGAGCTGCACGATTAGCAGCTGCTGGCATTGTTGGTATCTTGAAGAAGATTGGTAGGGATGGAAGTGGTGGCATCACAAGTGGACGTAGAAGTGATGTGAAAATGAAAAGAACAGTTGTTGCAATTGAAGGAGGTTTGTATTCTAGCTATACATTGTTTAGGGAGTATTTGCATGAAGCTTTGAACGAAATATTGGGGGAAGATATTGCCAAGCATGTAATTCTTAAGGTCACTGAAGATGGATCAGGCATTGGAGCAGCACTGCTTGCTGCCTCGCATTCATTCCTATGA 1500 0.444 MGRVVVGVAVGLATVACAVAAVVVGGRMRSRGKWKRVVRVLREVEEGCESSVERLRQVVDAMAVEMHAGLASEGGSKLKMLLTYVHNLPDGTEKGTYYALHLGGTNFRVLRVHLHDQQSSVLEHEVERQAIPQHLMTSTSKDLFDFIASSLKEFIEKEGDGSELSLDRRRELGFTFSFPVKQTSVSSGILIKWTKGFSIVDMVGVDVPACLQEALIRKGLDMRVAALVNDTVGTLALGHYHDSDTVASIIIGTGTNACYLERVDAIIKCQGLLTSSGYMVVNMEWGNFWSSHLPRTSYDIDLDSESPNPNDQGFEKMISGMYLGDIVRRVILRMSLDSDMFGPVSSKLSTPFTLRTPMMAAMHEDDSSDLREVARILRDILEIPDAPLKLRKVVVKACDVVTRRAARLAAAGIVGILKKIGRDGSGGITSGRRSDVKMKRTVVAIEGGLYSSYTLFREYLHEALNEILGEDIAKHVILKVTEDGSGIGAALLAASHSFL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02729 499 Pfam Hexokinase 248 494 IPR022673 GO:0005524|GO:0005975|GO:0016773
Viun11g02729 499 ProSitePatterns Hexokinase domain signature. 172 197 IPR019807 GO:0004396|GO:0005524|GO:0006096
Viun11g02729 499 FunFam Phosphotransferase 83 251 - -
Viun11g02729 499 FunFam Phosphotransferase 219 482 - -
Viun11g02729 499 SUPERFAMILY Actin-like ATPase domain 27 242 IPR043129 -
Viun11g02729 499 PANTHER HEXOKINASE 18 496 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Viun11g02729 499 ProSiteProfiles Hexokinase domain profile. 35 494 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Viun11g02729 499 Pfam Hexokinase 41 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Viun11g02729 499 SUPERFAMILY Actin-like ATPase domain 244 495 IPR043129 -
Viun11g02729 499 Gene3D - 61 482 - -
Viun11g02729 499 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Viun11g02729 499 CDD NBD_sugar-kinase_HSP70_actin 99 261 - -
Viun11g02729 499 Gene3D - 83 493 - -
Viun11g02729 499 PRINTS Hexokinase family signature 224 240 - -
Viun11g02729 499 PRINTS Hexokinase family signature 98 114 - -
Viun11g02729 499 PRINTS Hexokinase family signature 312 334 - -
Viun11g02729 499 PRINTS Hexokinase family signature 247 261 - -
Viun11g02729 499 PRINTS Hexokinase family signature 172 197 - -
Viun11g02729 499 PRINTS Hexokinase family signature 394 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02729 Viun-Chr11 39874414 39879221 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02729 K00844 - gmx:100813589 850.506