Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02725 ATGGGAAGTGGCAGCACCTATTTGACACTGACAATGTTAGTGGTCGCAGGATGTTTGATGTGTAACACAAGAGAGGTTTCAGCACAATGTGGAGGAAGTGTGACAGATCTTATATCGCAGTGCCAACAGTATGTGCAGAAAACAGGACCAAAGATTAAACCTTCAGCAGCGTGTTGTGCAGTGCTGAAACAATTTAATGTGCCGTGTGCTTGCAAACTCATCACCAAAGAAGTTGCGAGCCTTGTGAGTATTCCAAAAGCTGTGTTCGTTGGACGCTCTTGTGGTTTGAGTCTTCCCCCAGGAATGCGTTGTGGAGCTATTGTAATCCCTCCAGCCATGAAGTGA 345 0.4609 MGSGSTYLTLTMLVVAGCLMCNTREVSAQCGGSVTDLISQCQQYVQKTGPKIKPSAACCAVLKQFNVPCACKLITKEVASLVSIPKAVFVGRSCGLSLPPGMRCGAIVIPPAMK 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02725 114 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 105 IPR036312 -
Viun11g02725 114 CDD nsLTP_like 30 100 IPR044741 -
Viun11g02725 114 Gene3D - 27 101 IPR036312 -
Viun11g02725 114 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 11 112 - -
Viun11g02725 114 Pfam Probable lipid transfer 12 104 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02725 Viun-Chr11 39848715 39850676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02725 1 112 Acyl Lipid Metabolism Gene Families AT4G33550 38.793 2.18e-24 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02725 - - var:108339486 201.06