Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02715 ATGAACACGCTCCTCCGATCCACTCTGAGGACTAAGAATGCTTCATCTCTAGCATATGCTGCTGTTTCCAGAGGTGTTCAGGAAAATCTTCTTCAGGCTCCCTTGTTGTCTAGATCAAATAGCACGGAGTCTTCCTTGAAAAAGGATGATTCAGCTAATGAAGTGAAAGGTCGTCCAGGGTTCAAAGGCCATAGTATGCTTGCTCCTTTCACGGCTGGGTGGCAGTCTACTGATTTGCATCCTCTGGTTATAGAAAAGTCAGAGGGAAGCTATGTGTATGATACTAATGGGAAGAAATATCTTGACGCACTTGCTGGTTTATGGGCCACCGCTTTAGGGGGAAGTGAGTCACGCCTTGTTGATGCTGCTACCGCACAATTAAAGAAGTTGCCATTTTACCATTCCTTTTGGAATCGAACCACCGTACCTTCTCTGGAACTAGCTAAGGAACTCCTAGAAATGTTCACGGCCAAAAAAATGGCAAAAGCTTTTTTTGTTAACAGTGGATCAGAAGCCAATGACACTCAGGTGAAACTTGTATGGTATTATAACAATGCGCTTGGAAGGCCAAATAAGAAGAAGTTCATAGCTCGTGCTAAATCGTATCACGGTTCAACATTGATAGCAGCCAGTCTTTCCGGTCTTCCGGCCCTTCATCAGAAATTTGATTTGCCAGCACCTTTTGTATTGCATACTGACTGTCCACACTACTGGCGGTATCATCTTCCAGGTGAGACAGAGGAAGAATTTTCAACCAGATTGGCCAACAATTTAGAGCAGCTGATTCTGAAAGAGGGACCAGATACAATTGCGGCATTTATTGCTGAACCTGTAATGGGGGCAGGAGGTGTAATACCTCCACCAGCAACTTATTTTGAGAAGGTCCAAGCTGTTGTCAAGAAGTATGACATTCTTTTTATTGCCGATGAGGTAATCTGTGCCTTTGGAAGGCTTGGGACAATGTTTGGATGTGACAAGTACAACATTAAGCCGGACCTTGTATCCCTGGCTAAGGCATTGTCTTCTTCATATTTGCCAATTGGAGCTGTGCTTGTAAGTCCAGAAGTTTCAGAAGTTATATACGCACAAAGTAACAAACTTGGTTCATTTTCTCATGGGTTTACTTATTCTGGACACCCCGTAACCTGTGCTGTTGCAATTGAAGCTCTCAAAATCTACAAGGAAAGAAATATTGTTGACCAGGTGAACAAGATCTCCCAAAGGTTCCAAGATGGCATAAGAGCTTTTTCTGACAGTCCCATCATTGGAGAGATACGGGGAGTTGGCTTGATTCTGGGCACCGAGTTCACAGACAACAAATCACCTAATGATCCGTTTCCTCCTGAATGGGGTGTAGGTGCCTATTTTGGAGCTCAATGTGAGAAGCATGGGATGTTAGTTCGTGTAGCGGGAGATAGCATCATGATGTCTCCACCATATATTATTTCTCCTGAAGAAGTTGAAACGTTAATCAGTACTTATGGGAAAGCTTTGAAAGACACGGAAAAGAAGGTGCAAGAGCTCAAGTCTCAGCGCAAGTAG 1542 0.4371 MNTLLRSTLRTKNASSLAYAAVSRGVQENLLQAPLLSRSNSTESSLKKDDSANEVKGRPGFKGHSMLAPFTAGWQSTDLHPLVIEKSEGSYVYDTNGKKYLDALAGLWATALGGSESRLVDAATAQLKKLPFYHSFWNRTTVPSLELAKELLEMFTAKKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLANNLEQLILKEGPDTIAAFIAEPVMGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSSYLPIGAVLVSPEVSEVIYAQSNKLGSFSHGFTYSGHPVTCAVAIEALKIYKERNIVDQVNKISQRFQDGIRAFSDSPIIGEIRGVGLILGTEFTDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRVAGDSIMMSPPYIISPEEVETLISTYGKALKDTEKKVQELKSQRK 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02715 513 CDD OAT_like 76 498 IPR005814 GO:0008483|GO:0030170
Viun11g02715 513 Gene3D - 116 398 IPR015421 GO:0003824
Viun11g02715 513 MobiDBLite consensus disorder prediction 41 60 - -
Viun11g02715 513 MobiDBLite consensus disorder prediction 43 57 - -
Viun11g02715 513 FunFam Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, probable 116 396 - -
Viun11g02715 513 Gene3D Aspartate Aminotransferase, domain 1 82 498 IPR015422 GO:0003824
Viun11g02715 513 FunFam Class III aminotransferase 67 115 - -
Viun11g02715 513 Pfam Aminotransferase class-III 80 496 IPR005814 GO:0008483|GO:0030170
Viun11g02715 513 Coils Coil 491 513 - -
Viun11g02715 513 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 51 499 - -
Viun11g02715 513 SUPERFAMILY PLP-dependent transferases 67 499 IPR015424 -
Viun11g02715 513 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 306 343 IPR005814 GO:0008483|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02715 Viun-Chr11 39793589 39801242 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02715 K16871 - gmx:100815181 944.88