Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02707 ATGGGAGAAGTGGGTGAAGCTGAATATTTCAGATCAGAAATAGCTCTTCTGAATTTCTCAGATGCGAGTTTGAAACCCCCACTCTCTCCTCTGTTCATCCTCATTGATCCACTCACACCAACTGATTCATCATCTCCCTCAGAAGAATCTCATCCATCACAGAATCAAGAACAACACCCCAAAGACGCGTGGCTTCCGATCACCGAATCAAGAAATGGAAATGCCTTTTCTGCAGCCTTCCATGTTCTTAACTCTAATATCGGCTTCCAGGCTCTCATGCTTCCCGTTGCTTTTGCCACTCTTGGTTGGGTGTGGGGCACAGTATGTTTGACAGTGGCATTCTTTTGGCAGCTCTATAGCATATTTCTTCTTATTCAGCTTCACGAATCCGTCCCTGGGATTCGTCACAGCAGATACCTCTTCCTCGCCATGGCTGCATTCGGTAAAAGGTTAGGGAAAGTGGCAGCGCTATTCCCAGTGATGTATCTTTCAGGAGGAACATGCGTCATGCTTATCATCACCGGCGGTGGGACACTGAAACTGTTATTCAAGACACTTTGTGACAATGATAATGGAAACACTTGCAGTGCCCACGCGCTTACGGGGGCAGAGTGGTTCTTGGTCTTTACCTGTGCCGCCATTCTCGTTGCACAGTTGCCGAACCTCAACTCCATGGCCATGGTTTCTCTCGTCGGAGCCGTTACCGCCATCTCTTACTGCACCCTCTTTTGGGTTCTCTCTGTTAAGAAGGGTAGGCCCAACAACGTGTCCTATACCTCAACCCTGTCGCAAGAATCCACTGCGGTGGCTAAGATCAGCGACGTTCTCAATGCAGTTGGAATCATCGTGCTAGCTTACAGAGGTCATAATGTTCTGCTCGAGATACAGGGGACACTGCCTTCAGATTTCGAACGAACATCCAAAAAACCAATGCGCAGAGGAGTGAGTATGTCATATGTTCTAATCTCCATGTGTGTCTTTCCTCTTGCAATTGCCGGATTCTGGGCCTATGGAAACCAGATAAACGAGGGTGGATTATTGTATTCGTTTCCGCAATTTCACAGGAAGCAGCTAACGAAATTCTCCATGGGAGCAATATACGTTCTGGTGATAATACATTGTTTGAGCAGCTACCAAATCTATGCGATGCCGGTTTTCGACAACCTTGAGATCAGATTCACGAGCATAAGGAATGAGAAATGTTCAAGATTGGCGAGAACATGCATACGATTATTTTTCGGGGGATTGACATTTTTCATCGCTGTCACATTCCCGTTCCTTCCAAGCCTATCAGCACTAATTGGAAGCATCACCCTGGTGCCAATCACGTATTCATACCCCTGTTTCATGTTTCTATCGCTGAAGAAGCCTCGACCAAGAGGTTTTGTTTGGTGGTTCAACGCTGCGCTCGGGTTCTTAGGGTTGCTTCTCAGTGTTCTTCTGTTAGCTGCAGCCGCAAGGACTCTTGCTGACAAAGGCTTAAATGCGAACTTTTTCAGACCTTAA 1506 0.4688 MGEVGEAEYFRSEIALLNFSDASLKPPLSPLFILIDPLTPTDSSSPSEESHPSQNQEQHPKDAWLPITESRNGNAFSAAFHVLNSNIGFQALMLPVAFATLGWVWGTVCLTVAFFWQLYSIFLLIQLHESVPGIRHSRYLFLAMAAFGKRLGKVAALFPVMYLSGGTCVMLIITGGGTLKLLFKTLCDNDNGNTCSAHALTGAEWFLVFTCAAILVAQLPNLNSMAMVSLVGAVTAISYCTLFWVLSVKKGRPNNVSYTSTLSQESTAVAKISDVLNAVGIIVLAYRGHNVLLEIQGTLPSDFERTSKKPMRRGVSMSYVLISMCVFPLAIAGFWAYGNQINEGGLLYSFPQFHRKQLTKFSMGAIYVLVIIHCLSSYQIYAMPVFDNLEIRFTSIRNEKCSRLARTCIRLFFGGLTFFIAVTFPFLPSLSALIGSITLVPITYSYPCFMFLSLKKPRPRGFVWWFNAALGFLGLLLSVLLLAAAARTLADKGLNANFFRP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02707 501 PANTHER OS05G0424000 PROTEIN-RELATED 61 479 - -
Viun11g02707 501 MobiDBLite consensus disorder prediction 40 61 - -
Viun11g02707 501 Pfam Transmembrane amino acid transporter protein 72 483 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02707 Viun-Chr11 39708562 39711780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02707 59 501 Organic Solute Cotransporters AT1G47670 50.564 2.51e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02707 K26385 - gmx:100793408 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02707 11 39708562 39711780 Viun11g02707 11 39708562 39711780 ECH