Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02703 ATGAATAAACTACGTGCTTTATCAAGTTTCTGTTCCATTTTGCTGCTTTTGGAATTGGTTTTCGTTGCTGCGGAAGATCCTTATAGATTCTTCGACTGGACCGTTACCTACGGTGACATTTATCCTCTAGGAGTTAAACAGCAGGGTATTTTGATCAATGGCCAATTCCCAGGCCCTGAAATCTACTCTGTTACCAATGACAATTTGATCATCAACGTACGCAATAACTTGACCGAGCCGTTTCTTCTATCTTGGAATGGTGTTCAACAAAGGAGAAATTCTTATCAAGATGGAGTTTATGGAACCACATGCCCAATCCCTCCAGGGCAGAACTTCACATACACACTTCAAGTCAAAGATCAAATTGGGAGTTTCTTCTATTTCCCATCTCTTGCTTTTCATAAAGCAGCTGGTGGTTTTGGTGCAATCAAAATCCTCAGCAGACCAAGAATCCCTGTCCCATTTCCTGACCCAGCTGGTGATTTCAGTCTTCTTATTGGTGATTGGTACCAAATCAATCACAAGACACTTCAAAGTGTTCTAGATTTTGGACACAGACTCCCATTGCCTCAGGCCGTTCTTATCAACGGTCGTCCAAACGGCACAACATTCACAGTGGAACAAGGGAAGACATACAGGCTTAGAATATCAAATGTTGGACTTGAAAACTCTCTGAACTTTAGGATTGAAGGCCACACCATGACGTTGGTGGAAGTTGAGGGAACTCACACCATCCAAACCAAGTATTCCTCGTTAGATGTTCATGTGGGACAGTCTTATTCTGTGCTTATCACAGCTGATCAAGCTCCCAAAGACTACTACATTGCCGTGTCCACTCGTTTCACTGACAAAATCATCACAAGCACCGCCATCCTTCACTACAGTAACTCCCAGCAATCCGTTTCTGGCACAATCCCTGGTGGCCCAACCGATCAGATTGATTGGTCCATCCAACAAGCTCGTTCAATCAGGACAAACTTAACAGCAAGTGGACCAAGGCCAAATCCTCAAGGCTCCTACCATTATGGTTTGATTAATATCAGTAGGACAATTACATTGTCGAGTTCAGCAGCACAAGTGAACAAGAAACAGAGATATGCAGTGAACAGTGTATCATTCGTAGCAGCTGACACTCCTTTGAAGCTCGCGGATTACTTCAAGATTGGTGGGGTTTTCAAAGTAGGAAGCATTCCCGATAGCCCTTCTCGTAAACCCATGTATCTTGACACCTCAGTCATGGGTGCTGATTTTCGGGCCTTCGTTGAGATCGTGTTTCAGAACAACGAGAACATCGTCCAGAGCTGGCACATTGACGGATACTCCTTCTGGGTTGTAGGAATGGATGGTGGTGTGTGGACACCTCAAAGTCGAAACGAGTACAACCTCAGAGATGCAGTGTCAAGGTGCACAACACAGGTGTATCCCAAGTCATGGACTGCAATTTACATGGCACTGGATAATGTGGGTATGTGGAATGTGAGGAGTGAATTCTGGGCACGACAGTATCTTGGACAACAATTTTATCTGCGAGTGTATTCACCAGTTGGATCCATCAGGGATGAATACCCAATTCCCAAAAATGCTCTTCTTTGTGGCAAAGCAGCAGGAAGAACAAGTAGATGA 1623 0.4436 MNKLRALSSFCSILLLLELVFVAAEDPYRFFDWTVTYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVRNNLTEPFLLSWNGVQQRRNSYQDGVYGTTCPIPPGQNFTYTLQVKDQIGSFFYFPSLAFHKAAGGFGAIKILSRPRIPVPFPDPAGDFSLLIGDWYQINHKTLQSVLDFGHRLPLPQAVLINGRPNGTTFTVEQGKTYRLRISNVGLENSLNFRIEGHTMTLVEVEGTHTIQTKYSSLDVHVGQSYSVLITADQAPKDYYIAVSTRFTDKIITSTAILHYSNSQQSVSGTIPGGPTDQIDWSIQQARSIRTNLTASGPRPNPQGSYHYGLINISRTITLSSSAAQVNKKQRYAVNSVSFVAADTPLKLADYFKIGGVFKVGSIPDSPSRKPMYLDTSVMGADFRAFVEIVFQNNENIVQSWHIDGYSFWVVGMDGGVWTPQSRNEYNLRDAVSRCTTQVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYLRVYSPVGSIRDEYPIPKNALLCGKAAGRTSR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02703 540 Pfam Multicopper oxidase 378 513 IPR011706 GO:0005507|GO:0016491
Viun11g02703 540 Gene3D - 28 149 IPR008972 -
Viun11g02703 540 SUPERFAMILY Cupredoxins 19 175 IPR008972 -
Viun11g02703 540 Gene3D - 159 332 IPR008972 -
Viun11g02703 540 FunFam Monocopper oxidase-like protein 159 332 - -
Viun11g02703 540 Pfam Multicopper oxidase 162 296 IPR001117 -
Viun11g02703 540 Pfam Multicopper oxidase 35 148 IPR011707 GO:0005507
Viun11g02703 540 PANTHER MULTI-COPPER OXIDASE 47 507 IPR045087 -
Viun11g02703 540 SUPERFAMILY Cupredoxins 344 533 IPR008972 -
Viun11g02703 540 Gene3D - 343 538 IPR008972 -
Viun11g02703 540 CDD CuRO_3_AAO_like_1 377 496 IPR034275 GO:0005507
Viun11g02703 540 FunFam L-ascorbate oxidase homolog 28 149 - -
Viun11g02703 540 SUPERFAMILY Cupredoxins 155 334 IPR008972 -
Viun11g02703 540 FunFam Monocopper oxidase-like protein 344 540 - -
Viun11g02703 540 CDD CuRO_1_AAO_like_1 30 145 IPR034273 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02703 Viun-Chr11 39693205 39696749 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02703 - - gmx:100818914 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02703 11 39693205 39696749 Viun11g02703 11 39693205 39696749 ECH