Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02699 ATGGAGAGAGGTAGTGGGAAGCTGGGGAGGAAGAAAAGTGGTGGAAACGGACAGGTTCTAGACGGTTCCAATATTATGGAGTTGGTTGGAAACGACCAGGTTTTCACCACCTTCGTCGACAATAAGTTCCAACAATTAGACATAGACAGAGATGGCAAACTCTCTGTCAAAGAGCTCCAACCTGCTGTTGCTGACATAGGTGCTGCTCTCGGCCTCCCTCCTCACGGCACCAATCCTGATTCTGATCACATCTACTCCGAGGTGTTGAATGAATTCACTCATGGGAAGCAGGAAAAAGTGAGCAAAACCGAGTTCAAAGAGGTTCTCTCTGATATTCTCTTGGGTATGGCTGCTGGACTGAAGCGTGACCCAATTGTGATACTTCGCATTGATGGGGAAGATCTTCTGGAATTTGTTAACGGTTCAGCTTATGAAGCAGAAATGGTGTCTATATTCTCTCAGATTGAATCCCCTAACAGATCACTGCATGACCATATAATTGAAGCTCTTGGCAAGCTCACGGTGGAACAAGGAATTCCTCCTATAGCAGATTCTTGGGTTTTAAGCAACATTGTAGAACCGGCACTGCTGTCTCAAGATAGATCTGGTTTGGATAAGCCTGTTTCTCAGGAGACATTTTTAAAGGAATTTAAGGTAGTGGCATTGGCTGTGGCGAATCGTCTTAAGGAGCAACCAGTCATAGTTGCTCACAGTGAGAACACCTTTGATGGAAGTGGTGTTAAGAGACTACTATCCAACAAGTTTGAATTGGACAAGACTTTGAACTCAGCTCTAGAGACTTTGCCTAAAGATCGAAATGGAAAGATGTCAAAAGAGTATCTACGGGTGGCACTGGACATTGTGGCTCCATCCGCTGGTTTACCTCCCCTTGGTGCAATTGAAGAGATGGATAAGGTTATTGGTGAAGTGTTTAAGATGGTGAATGCAGATGAAGCGAAGATGGTGAAAGAAGAGGAGTTCAAGAAAGTTTTAACTGAAATACTGGGGAGCATTATGTTGCAGTTGGAGGGAAGTCCCATATCGGTTTCTTCAAATTCAGTGGTGCACGAGCCTCTAGACTCATCTTCTACACTTCTTCAACCATCCTCTAGTGAAACTGCACCCTAG 1128 0.4459 MERGSGKLGRKKSGGNGQVLDGSNIMELVGNDQVFTTFVDNKFQQLDIDRDGKLSVKELQPAVADIGAALGLPPHGTNPDSDHIYSEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFVNGSAYEAEMVSIFSQIESPNRSLHDHIIEALGKLTVEQGIPPIADSWVLSNIVEPALLSQDRSGLDKPVSQETFLKEFKVVALAVANRLKEQPVIVAHSENTFDGSGVKRLLSNKFELDKTLNSALETLPKDRNGKMSKEYLRVALDIVAPSAGLPPLGAIEEMDKVIGEVFKMVNADEAKMVKEEEFKKVLTEILGSIMLQLEGSPISVSSNSVVHEPLDSSSTLLQPSSSETAP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02699 375 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 130 354 - -
Viun11g02699 375 SUPERFAMILY EF-hand 42 343 IPR011992 -
Viun11g02699 375 ProSitePatterns EF-hand calcium-binding domain. 47 59 IPR018247 -
Viun11g02699 375 MobiDBLite consensus disorder prediction 1 22 - -
Viun11g02699 375 SMART efh_1 306 334 IPR002048 GO:0005509
Viun11g02699 375 SMART efh_1 260 288 IPR002048 GO:0005509
Viun11g02699 375 SMART efh_1 38 66 IPR002048 GO:0005509
Viun11g02699 375 MobiDBLite consensus disorder prediction 350 375 - -
Viun11g02699 375 Gene3D - 21 120 - -
Viun11g02699 375 ProSiteProfiles EF-hand calcium-binding domain profile. 34 69 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02699 Viun-Chr11 39681143 39685943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02699 18 373 EF-hand Containing Proteins AT4G38810 69.638 2.13e-175 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02699 - - gmx:100820516 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02699 11 39681143 39685943 Viun11g02699 11 39681143 39685943 ECH