Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02694 ATGAGACCTCAGAGAACGTCGATCTACGCCGTCACGTCATGGGTGAGGCGACAACCCCCAAAGGTGAAGGCTTTTCTCGCCGTCGTTTCCGGCATGGCGGCTCTTGTCCTCCTCCGCTTTATCGTCCACGATCACGACAATCTCTTTGTTGCTGCTGAGGCTGTCCACTCCCTGGGAATTTCCGTCCTCATCTATAAGCTCATGAAGGAGAAGACTTGTGCTGGGTTATCACTTAAATCCCAGGAATTAACAGCTATATTTTTAGCTGTTAGGCTTTACTGCAGTTTTGTCATGGAATATGATATCCACACCATACTTGATTTCGCTACTTTCATAACCACACTGTGGGTTATATATATGATTCGTTTTAAGCTGAAGGCTAGTTACATGGAGGAGAAGGATAACTTTGCAATATACTATGTGGTGGTCCCTTGTGCTGTGTTAGCATTGCTTATTCATCCATCAACTTCTCATCATTTATTAAACAGGATTTCCTGGGCATTCTGCGTATATCTGGAAGCTGTCTCAGTCCTGCCCCAGCTGCGGGTCATGCAGAACACCAAGATTGTTGAGCCATTCACAGCCCATTACGTATTTGCACTGGGTGTTGCAAGATTCTTGAGCTGTGCACATTGGGTTCTTCAGGTATTAGATAGCCGAGGGCATTTGTTGGTAGCCTTAGGGTATGGTTTATGGCCATCAATGGTTCTTATCTCAGAAATTGTCCAGACCTTCATCTTGGCAGATTTCTGTTACTATTATGTCAAAAGTGTTTTCGGGGGACAGCTTGTTCTACGTCTACCCTCTGGAGTGGTGTGA 819 0.4542 MRPQRTSIYAVTSWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDFATFITTLWVIYMIRFKLKASYMEEKDNFAIYYVVVPCAVLALLIHPSTSHHLLNRISWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02694 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016020|GO:0046923
Viun11g02694 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 47 270 IPR000133 GO:0006621|GO:0016020|GO:0046923
Viun11g02694 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016020|GO:0046923
Viun11g02694 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016020|GO:0046923
Viun11g02694 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016020|GO:0046923
Viun11g02694 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016020|GO:0046923
Viun11g02694 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016020|GO:0046923
Viun11g02694 272 Coils Coil 271 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02694 Viun-Chr11 39671427 39674382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02694 5 272 Miscellaneous Gene Families AT2G21190 88.433 3.31e-180 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02694 - - gmx:100803652 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02694 11 39671427 39674382 Viun11g02694 11 39671427 39674382 ECH