Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02689 ATGCAGGTTTCTACCCGGCGCCAAGGAGCACTTTTGTGCTTCTGGTTGTCTCTGTCATTTCTGGTATTAGGCTTCTGCTATGGCGACCACAGTACAGTGGAGCTAGTTGGACTCGGAGAATGCACAGACTGCAATGCCAAAAATATTAAAACTAGCCAGGCTTTCTCAGGACTACGTGTAACAGTAGAGTGCAAAGCAGAAAGTGGGGACTTTGAAAGGAGAGGGGTTGGTGAGGTTGACGAAAATGGAAACTTCAAAGTGTCTCTTCCACATGACATTGTGAAAGGTGATGAACTGAAAGAAGAGTGTTATGCTCAGTTGCTTAGTGCTTCAGCTGCTCCTTGTCCTTCCCATGATGGTCCTTTCAGCACCAAAATTGTGATCAAGTCAAAAGGTGTTGAGAAACACACACTTCGTCCTTCTGGAAAACTCAAGTTTTCTTCTGAGACATGTGCTTCGGCTTTCTTCTGGAAGCACCACCCTCTCTTTCCTAAGCTTCCTCCTCATCCACCTATCACCATTCCTCCGATAGTATTTCCACCGCTTCCACCGAAGATTTTCCATAAACATCCTCCACCGGTGTATACTCCTCCGCCGGTATATACTCCTCCACCTGTGTATTCTCCTCCACCTGTTGAACCTTCTCCTCCTCCTAAGGTTGTTAAGCCTCCACCATGCCCACCAAAGGAACCTCCAAAACCACCAAAACCATCCCCTCCAAAGGAGCCTCCTCATCCAAAACCACCTAAGCCTCATCCAAAACCACCAAAACCATGCCCCCCAAAGGAGCCTCCTCATCCAAAACCTCCCAAGCCTCACCCAAAACCACCAAAACCAAGTCCACCAAAGGAGCCACCTCATCCAAAACCACCAAAGCCATGCCCTCCAAAGGTTAAACCTCCTCTTCCACCAAAACCACCAAAACCACCAAAGGTCAAGCCTCCTGTTCCACCACCGGTTAAGCCTCTCCCCCCACCGGTTCCAAAGAAGCCATGCCCACCAAAGCATCCACTTCTCCCTCCACTCAAGCCACATCCACATCCACTTCTTCCTCCACTTAAGCCACACCCACTTCCTCCACTCAAGCCACTTCCACCTCTTCCCAAACTCCCTCCAAAGCACTTTTTCCATCACCCCAAATGGCCTCCGATTCCCCCATCTTCATCTCATCCTTAA 1176 0.4932 MQVSTRRQGALLCFWLSLSFLVLGFCYGDHSTVELVGLGECTDCNAKNIKTSQAFSGLRVTVECKAESGDFERRGVGEVDENGNFKVSLPHDIVKGDELKEECYAQLLSASAAPCPSHDGPFSTKIVIKSKGVEKHTLRPSGKLKFSSETCASAFFWKHHPLFPKLPPHPPITIPPIVFPPLPPKIFHKHPPPVYTPPPVYTPPPVYSPPPVEPSPPPKVVKPPPCPPKEPPKPPKPSPPKEPPHPKPPKPHPKPPKPCPPKEPPHPKPPKPHPKPPKPSPPKEPPHPKPPKPCPPKVKPPLPPKPPKPPKVKPPVPPPVKPLPPPVPKKPCPPKHPLLPPLKPHPHPLLPPLKPHPLPPLKPLPPLPKLPPKHFFHHPKWPPIPPSSSHP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02689 391 PRINTS Proline rich extensin signature 186 202 - -
Viun11g02689 391 PRINTS Proline rich extensin signature 228 253 - -
Viun11g02689 391 PRINTS Proline rich extensin signature 164 185 - -
Viun11g02689 391 PRINTS Proline rich extensin signature 206 223 - -
Viun11g02689 391 MobiDBLite consensus disorder prediction 283 391 - -
Viun11g02689 391 Pfam Pollen protein Ole e 1 like 37 116 - -
Viun11g02689 391 MobiDBLite consensus disorder prediction 256 270 - -
Viun11g02689 391 MobiDBLite consensus disorder prediction 208 391 - -
Viun11g02689 391 PRINTS Small proline-rich protein signature 236 248 - -
Viun11g02689 391 PRINTS Small proline-rich protein signature 250 259 - -
Viun11g02689 391 PRINTS Small proline-rich protein signature 302 311 - -
Viun11g02689 391 PRINTS Small proline-rich protein signature 274 280 - -
Viun11g02689 391 PRINTS Small proline-rich protein signature 288 296 - -
Viun11g02689 391 MobiDBLite consensus disorder prediction 208 242 - -
Viun11g02689 391 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 8 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02689 Viun-Chr11 39647856 39649661 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02689 - - vum:124829568 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02689 11 39647856 39649661 Viun11g02689 11 39647856 39649661 ECH