Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02679 ATGGTCCAACCGGCGATGACGCAGTTCCTCAACTCCGTTCTCTCTCAGCGCGGCCCCTCCGCCGTCCCTTACTCCGAGGACACCAAGTGGCTCATCCGCCAGCACCTGGTGGCGCTCACCGCCGCCTTCCCTTCGCTCGAGCCCAAAACGGCAGCCTTTACGCACAACGACGGTCGTTCCGTCAACCTCCTCCAGGCCGACGGCACCATCCCCATGACGTTCCAAGGCGTCACCTACAACATCCCCGTCGTCATCTGGCTCATGGAGTCCTACCCCCGCCACCCGCCCTGCGTCTACGTCAATCCCACGCGCGACATGATCATCAAACGCCCCCACCCTCACGTTAACCCTTCTGGTTTGGTTTCCGTCCCTTACTTGCAGAATTGGACCTACCCTAGTTCCAACCTTGTCGATCTCGTTCTCAATCTCAGCCTCCACTTCGGTCGTGACCCTCCCCTCTATTCCCAGCGCAGACCTAACCCTAACCCTAATCCCAACCCCAACCCCAACCCTAATCCAAATCCTCACCCTCACCCTCACCCCCATCCCAGTTTCGGAAACTCTTCCTCCAATTTATCTTCTTCCACTTCTTCTTCATCTGGCTACCCCCACGCTCAACCCCCCTCTAGGCCATACCCTCCTTCCCCTTACCCTGCTCCCGCTTCCAGGGTTCAGGCCACTGAGGATCCCTCTGAGGTTTTCAAGCGGAACGCGATTAACAAGCTTGTGGAGATGGTTCATGGGGACGTTTCCGCGTTGAGGAAGACCAGGGAGGGTGAGATGGAGGGGCTGTTTAGTTTGCAGGGCGTGTTAAAGCAGCGGGAGGAGACTCTCAACAAGGGGTTGAAGGAGATGCAGGAGGAGATGGAGGCTCTGGAGCAACAGTTGCAGATTGTGTTGATGAACACTGATGTTTTGGAGGGGTGGTTGAGGGATAACCAGGGGAAGAAACTGGGCGGTTTGGACAATCCTGAGGATGCTTTTGAGTGTGCGGATGTACTCTCCAAGCAGATGCTTGACTGCACTGCCGCTGATTTGGCTATCGAGGACACTCTTTATGCGTTGGATAAGTCTCTTCAAGTGGGAGCTCTGCCGTTTGATCAGTATTTGAGGAGTGTGAGGGCGCTATCCAGGGAACAGTTCTTTCACCGGGCCACCACGGCGAAAGTTAGAGCGGCCCAGTTGCAGGCTCAGGTTGCCAATATGGCTGCTCGGAATCACCATTATGGTAGCTGA 1236 0.5615 MVQPAMTQFLNSVLSQRGPSAVPYSEDTKWLIRQHLVALTAAFPSLEPKTAAFTHNDGRSVNLLQADGTIPMTFQGVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSGLVSVPYLQNWTYPSSNLVDLVLNLSLHFGRDPPLYSQRRPNPNPNPNPNPNPNPNPHPHPHPHPSFGNSSSNLSSSTSSSSGYPHAQPPSRPYPPSPYPAPASRVQATEDPSEVFKRNAINKLVEMVHGDVSALRKTREGEMEGLFSLQGVLKQREETLNKGLKEMQEEMEALEQQLQIVLMNTDVLEGWLRDNQGKKLGGLDNPEDAFECADVLSKQMLDCTAADLAIEDTLYALDKSLQVGALPFDQYLRSVRALSREQFFHRATTAKVRAAQLQAQVANMAARNHHYGS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02679 411 Gene3D Ubiquitin Conjugating Enzyme 1 154 IPR016135 -
Viun11g02679 411 MobiDBLite consensus disorder prediction 183 205 - -
Viun11g02679 411 MobiDBLite consensus disorder prediction 206 220 - -
Viun11g02679 411 SUPERFAMILY Endosomal sorting complex assembly domain 332 392 IPR037202 -
Viun11g02679 411 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 1 399 - -
Viun11g02679 411 MobiDBLite consensus disorder prediction 151 230 - -
Viun11g02679 411 Pfam Vps23 core domain 326 389 IPR017916 -
Viun11g02679 411 SUPERFAMILY UBC-like 15 153 IPR016135 -
Viun11g02679 411 ProSiteProfiles UEV domain profile. 13 157 IPR008883 GO:0015031|GO:0036211
Viun11g02679 411 Coils Coil 275 302 - -
Viun11g02679 411 MobiDBLite consensus disorder prediction 156 182 - -
Viun11g02679 411 ProSiteProfiles Steadiness box (SB) domain profile. 332 400 IPR017916 -
Viun11g02679 411 Gene3D - 333 393 - -
Viun11g02679 411 Pfam UEV domain 33 153 IPR008883 GO:0015031|GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02679 K12183 - gmx:100778834 662.914