Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02631 ATGAACATGAAGAACCTGAACATCTCTTTGTGCGTGCTTCTCATAGCTCTTGTGCGCTTAGGGGGAAGTGCACCATCAAGCTTCAACTATGGTGATGCCCTTGACAAGAGTTTGATGTTCTTTGAAGCACAGAGATCTGGGAAGCTACCACTGCAGCAGCGAGTCAAGTGGCGTGGTGATTCTGGCCTCCAAGATGGTTTTCAGCAAGGAGTAGACCTGGTGGGAGGGTACTATGATGCAGGAGATCATGTGAAGTTTGGGTTGCCAATGGCGTACAGTGTGACAATGCTTGCATGGGGAGCCATTGAATTCAGCAAGGAAATTACGAACTTGAACCAAATGGGACATGCATTATGGGCCATTAAATGGGGAACTGATTACTTTGTCAAAGCACACACTCAACCCAATGTTCTTTGGGGACAGGTGGGAGATGGAGTTTCTGATCATTACTGCTGGGAGCGTGCTGAAGACATGACTACATCAAGAGGTGCTTACAAAATTGATGAACAACACCCTGGTTCTGATCTGGCAGGTGAAACTGCAGCTGCATTGGCTGCAGCAGCTTTAGCTTTCAGGCCCTACAATTCATCTTACTCTGGTCTTCTGCTGGTTCATGCAAAACAGCTGTTCACATTCGCAGACAGGTTCAGAGGTCTCTATGATGACTCTATTTCAAGTGCTCAGCAATTCTACACTTCTTCCGGTTACTCAGATGAATTATTATGGGCTGCCACGTGGCTACACCTGGCAACTGGAGATGAATACTACCTAAAGTATGTGGTGGACAATGGTGTGTACATGGGTGGAACTGGCTGGGCAATGAAAGAGTTCTCTTGGGACAACAAATATGCTGGTGTGCAGATCCTCCTAACAAAGATATTACTGGAAGGGAAAGCTGGTCCTTATGCTGATACACTAAAGCAATACCAGGCCAAGGCAGATTATTTTTCATGTGCCTGCTTGCAAAAGAATGATGGTTACAATGTCCAGAAAACACCAGGTGGCTTACTATACGTGCGTGAATGGAACAACATGCAGTATGTTTCTTCTGCTACATTCCTTTTAGCTGTTTACTCTAATTACCTCTCAGCAACAAAAGCAAATCTCAACTGTCCAGATGGACAAACTCAGCCTCAGGAGCTCCTCAACTTTGTTAAGTCTCAGGCTGATTATATCCTTGGTAATAACCCTGCGGATACGAGCTACTTGGTTGGATATGGAGCAAAATATCCTCTTCATGTTCACCACAGGGGCGCTTCCATTGCTTCAATCTTTTCTCTTCACAGTGAGGTTGGCTGCACTCAAGGATTTGAGCTGTGGTATAACCGTGCTGAGTCAAATCCTAATGTCATCTGTGGTGCCCTCGTGGGTGGTCCTGATAAAAATGATGGCTTCTCCGATGACAGATCCAATTATGAACAAACTGAGCCTACACTTTCAGGTTCTGCTCCTCTTGTGGGCATCTTTGCTAAACTGCAGAGTTTGTATGGTAATATAGGTGAAGGTTACAACCATAATGAATCACCAGTAACCCAACAAAAAACACAAAGTTACAACCAAGATGAATCACAAGTGCCTCAGCAAAAAACACCGAGCACATATGCAGGAAAAGAAACAGCATCTAAAACATCAGAAGGTTGTGTTGCAGGTTGCCCCGTGCAATTTCTTCACTCAATAAGTAGCTCATGGACTGTTGGAGGTGCAACCTACTACCGTCACAGGGTCATAATCAAGAATACTTCTTCGAAGCCAATCTCAGATCTTAAGTTGGTGGTTAAGGACCTCACAGGCTCTTTATGGGGTCTCTCTTCAACAGAAGAAAAGGACACCTATGAACTTCCCCAATGGCAGAAGGTCTTGAATCCTGGCTCTGAGTGTATATTTGTATATGTTCAAGGCGGACCCCAAGCTAAAGTTTCCATTAAAAGCTTCCAATGA 1938 0.4474 MNMKNLNISLCVLLIALVRLGGSAPSSFNYGDALDKSLMFFEAQRSGKLPLQQRVKWRGDSGLQDGFQQGVDLVGGYYDAGDHVKFGLPMAYSVTMLAWGAIEFSKEITNLNQMGHALWAIKWGTDYFVKAHTQPNVLWGQVGDGVSDHYCWERAEDMTTSRGAYKIDEQHPGSDLAGETAAALAAAALAFRPYNSSYSGLLLVHAKQLFTFADRFRGLYDDSISSAQQFYTSSGYSDELLWAATWLHLATGDEYYLKYVVDNGVYMGGTGWAMKEFSWDNKYAGVQILLTKILLEGKAGPYADTLKQYQAKADYFSCACLQKNDGYNVQKTPGGLLYVREWNNMQYVSSATFLLAVYSNYLSATKANLNCPDGQTQPQELLNFVKSQADYILGNNPADTSYLVGYGAKYPLHVHHRGASIASIFSLHSEVGCTQGFELWYNRAESNPNVICGALVGGPDKNDGFSDDRSNYEQTEPTLSGSAPLVGIFAKLQSLYGNIGEGYNHNESPVTQQKTQSYNQDESQVPQQKTPSTYAGKETASKTSEGCVAGCPVQFLHSISSSWTVGGATYYRHRVIIKNTSSKPISDLKLVVKDLTGSLWGLSSTEEKDTYELPQWQKVLNPGSECIFVYVQGGPQAKVSIKSFQ 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02631 645 SMART CBM49_2 553 633 IPR019028 GO:0030246
Viun11g02631 645 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 391 417 IPR018221 -
Viun11g02631 645 PANTHER ENDO-1,4-BETA-GLUCANASE 10 494 - -
Viun11g02631 645 Gene3D - 26 496 IPR012341 GO:0005975
Viun11g02631 645 FunFam Endoglucanase 26 497 - -
Viun11g02631 645 SUPERFAMILY Six-hairpin glycosidases 27 498 IPR008928 GO:0005975
Viun11g02631 645 MobiDBLite consensus disorder prediction 503 538 - -
Viun11g02631 645 Pfam Carbohydrate binding domain CBM49 554 632 IPR019028 GO:0030246
Viun11g02631 645 Pfam Glycosyl hydrolase family 9 30 488 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02631 Viun-Chr11 39232022 39236467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02631 28 644 Glycoside Hydrolase AT1G48930 66.775 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02631 K01179 - gmx:100802420 1164.06