Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02629 ATGGCGACAACACCATTTTCTGGTTTGCAATTTGCAATGTCAAGATCATGCATTCCATCATCACAGAAGATTGCAGATGCAAGTGCTTTGGTTCTTGGTGGCAAGTCCAAGATTGAATCATGGAATAAACTTGCAAGTGCATGTAATGTTGCCTCAGTGCAACCTCTCCAGCGGGGCTTCACTTCATCGTCCATGAAATCTGTCAAAAGTGTCACAAAGGCTACATCTGAGTCTAGTGCAGAAAGTGCTGTCTCAGGATTGCCAATTAATCTGAAAGGTAAAAGGGCTTTCATTGCTGGTGTTGCTGATGACAATGGATACGGATGGGCAATTGCAAAATCTCTTGCTGCAGCAGGAGCTGAAATTCTTGTCGGCACATGGGTTCCTGCTCTGAATATTTTTGAGTCCAGCCTACGGCGTGGAAAGTTTGACGAGTCACGCGTATTACCAGACGGATCAATGATGGAGATTACCAAAGTTTATCCATTGGATGCAGTTTTTGACAATCTCGATGAAGTGCCAGAAGATATAAAAACAAACAAGCGGTACGCAGGATCCACTAAATGGACTGTTCAGGAAGTTGCTGAATCTGTTAAAGAAGACTTTGGCAGCATAGATATCCTTGTGCACTCACTTGCCAACGGACCAGAGGTGACAAAACCATTGTTGGAGACATCTCGGAATGGATATCTTGCTGCAATATCTGCATCTAGCTACTCCTATGTCTCTTTACTAAAGCATTTTCTTCCAATTCTGAACACAGGTGGCTCTTCAATCTCTCTGACATACATTGCTTCTGAAAGGATCATTCCTGGATATGGTGGTGGTATGAGTTCTGCAAAAGCTGCGCTGGAGAGTGATACCCGAGTTCTTGCTTTTGAAGCAGGAAGAAAGCGCAGAATTAGAGTCAATACTATATCTGCTGGTCCACTGAGAAGTCGGGCTGCAAAGGCTATTGGATTCATTGATATGATGATTGATTATTCATTAGCCAATGCACCTCTACAGAAAGAACTATCGGCAGAGGAGGTGGGCAACGCAGCTGCCTTCTTAGCATCACCTTTGGCATCTGCTATCACTGGTACTGTTCTGTATGTTGACAATGGTCTGAATGCTATGGGTGTTGGAGTTGACAGTCCAATATTTAAAGATCTTGACATTCCCAAAGACCAGCATTAA 1179 0.436 MATTPFSGLQFAMSRSCIPSSQKIADASALVLGGKSKIESWNKLASACNVASVQPLQRGFTSSSMKSVKSVTKATSESSAESAVSGLPINLKGKRAFIAGVADDNGYGWAIAKSLAAAGAEILVGTWVPALNIFESSLRRGKFDESRVLPDGSMMEITKVYPLDAVFDNLDEVPEDIKTNKRYAGSTKWTVQEVAESVKEDFGSIDILVHSLANGPEVTKPLLETSRNGYLAAISASSYSYVSLLKHFLPILNTGGSSISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKRRIRVNTISAGPLRSRAAKAIGFIDMMIDYSLANAPLQKELSAEEVGNAAAFLASPLASAITGTVLYVDNGLNAMGVGVDSPIFKDLDIPKDQH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02629 392 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 1 384 IPR014358 GO:0004318|GO:0006633
Viun11g02629 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 92 374 IPR036291 -
Viun11g02629 392 FunFam Enoyl-[acyl-carrier-protein] reductase [NADH] 94 320 - -
Viun11g02629 392 Gene3D - 94 320 - -
Viun11g02629 392 Gene3D Enoyl acyl carrier protein reductase 321 378 - -
Viun11g02629 392 FunFam Enoyl-[acyl-carrier-protein] reductase [NADH] 322 377 - -
Viun11g02629 392 Pfam Enoyl-(Acyl carrier protein) reductase 190 371 - -
Viun11g02629 392 PRINTS Glucose/ribitol dehydrogenase family signature 277 296 IPR002347 -
Viun11g02629 392 PRINTS Glucose/ribitol dehydrogenase family signature 334 354 IPR002347 -
Viun11g02629 392 PRINTS Glucose/ribitol dehydrogenase family signature 203 214 IPR002347 -
Viun11g02629 392 PRINTS Glucose/ribitol dehydrogenase family signature 299 316 IPR002347 -
Viun11g02629 392 CDD ENR_SDR 93 374 IPR014358 GO:0004318|GO:0006633
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02629 Viun-Chr11 39226523 39231946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02629 1 386 Acyl Lipid Metabolism Gene Families AT2G05990 73.643 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02629 K00208 - gmx:100785606 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02629 11 39226523 39231946 Viun11g02629 11 39226523 39231946 ECH