Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02622 ATGATTGTAGCAGCGCGAAAACTCTCCTCTTCAAATATTAAACCACTCTTTTATCTATCGTTTCTTTGTGAATGCAGAAACCATTTCCACTCAAATGTCTCTTCGACCTTAATACCTTACTCAAAAACCCGTCTCCGGAACTCCACAAAATTTTCATCTCAGTCGTGGGTTAATTTGTTTAGGTTTTGCTCTTCACATCATGCAGATTCAGCTACAAAACAGAATTTACCCCTCTGCCGTGAAGGTAATTATGATGATGTCAATTCCCAATCTCTTCGTGTTTGCCCTGGCTGTGGGGTTCATATGCAAGATTCAAATCCAAAGCACCCCGGTTATTTTATCAAACCATCAGAGAAGGACTTCAATTATAGACTGTATAACAATCTGGAACCCGTTGCACAAGAGCCTGAGTTCTCCAACTCTGTTAAAAAGGGGTTTGTTATTGAACCAGAAAAGCTTAATGGTGATGATGTGGGCTTGATTAAGAAACCAGAGAAGCCTGTGGTCTGTGCACGCTGTCATTCGTTAAGGCACTATGGGAAGGTGAAGGATCCTACTGTGGAAAACTTGCTACCTGATTTTGACTTTGATCACACTGTGGGTAGGAAGTTGGCATCAACAAGTGGGACCCGGTCTGTGGTGCTGATGGTTGTGGACGTAGTGGATTTTGAGGGGTCGTTTCCAAGGAAGGTTGCAAAGTTGGTTTCTAAGACAATTGAGGATTATTCTGCTGCATGGAAGCAGGGTAAGTCAGGGAATGTGCCTAGAGTTGTGCTTGTGGTGACAAAGATAGACTTGTTGCCTAGCTCGTTGTCACCAACAAGGTTGGAGCATTGGATTAGGCAGAGAGCAAGAGATGGTGGGATTAATAAGATTACTAGTTTGCACATGGTGAGTGCACTCAGGGATTGGGGACTGAAGAATCTTGTGGATAATGTAGTTGATCTGGCTGGACCTAGGGGTAATGTGTGGGCTGTTGGGGCACAAAATGCAGGGAAGAGTACTTTGATAAACTCTATAGGGAAGTATGCTGGAGGGAAGATTACACATCTGACTGAAGCACCTGTGCCAGGGACTACACTAGGAATTGTTAGAGTGGAGGGTGTTCTTCCAAGTCAAGCAAAACTGTTTGATACACCCGGCCTTCTTCATCCTTACCAGATTACATCGAGGTTGATGAGGGATGAGCAAAAGCTTGTTCATATAGGAAAGGAATTGAAACCAAGGACATACAGAATTAAGGCTGGCCATTCAGTTCACATAGCTGGTCTAATGAGATTGGATATAGAAGACACATCCCTGGATTCTGTTTATGTCACAGTGTGGGCTTCTCCTTATCTTCCACTGCATATGGGTAAAATAGAAAATGCTTCTAAATTGTTCCAATATCATTTTGGCCAACAGTTACAGCCACCAATTGGAGAAAAACGAGTACAAGAACTGGGGAATTGGGTAAGAACGGAGTTCCATGTTAGCGGGAACAGTTGGGAGTCAAGTTCAGTAGACATTGCTGCTGCTGGACTCGGGTGGTTTGCCATTGGACTTAAAGGAGATGCAGGGTTAGGTGTTTGGACTTATGAAGGAGTTGATGTTGTTCTTCGCAATTCTTTAATACCCTATAGATCACATATTTTTGAAGTTGCAGGATTTACAGTATCCAAGATTGTTTCCCAGTCCGACCAAACTTTAAACAAGTCAAAGGAACGAAATAACAAAAAGCCAAAAAACCAGTTTGTTGAATCACCTCTTTTGACTTCTGATAGAGTCATATAA 1773 0.4258 MIVAARKLSSSNIKPLFYLSFLCECRNHFHSNVSSTLIPYSKTRLRNSTKFSSQSWVNLFRFCSSHHADSATKQNLPLCREGNYDDVNSQSLRVCPGCGVHMQDSNPKHPGYFIKPSEKDFNYRLYNNLEPVAQEPEFSNSVKKGFVIEPEKLNGDDVGLIKKPEKPVVCARCHSLRHYGKVKDPTVENLLPDFDFDHTVGRKLASTSGTRSVVLMVVDVVDFEGSFPRKVAKLVSKTIEDYSAAWKQGKSGNVPRVVLVVTKIDLLPSSLSPTRLEHWIRQRARDGGINKITSLHMVSALRDWGLKNLVDNVVDLAGPRGNVWAVGAQNAGKSTLINSIGKYAGGKITHLTEAPVPGTTLGIVRVEGVLPSQAKLFDTPGLLHPYQITSRLMRDEQKLVHIGKELKPRTYRIKAGHSVHIAGLMRLDIEDTSLDSVYVTVWASPYLPLHMGKIENASKLFQYHFGQQLQPPIGEKRVQELGNWVRTEFHVSGNSWESSSVDIAAAGLGWFAIGLKGDAGLGVWTYEGVDVVLRNSLIPYRSHIFEVAGFTVSKIVSQSDQTLNKSKERNNKKPKNQFVESPLLTSDRVI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02622 590 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 64 577 - -
Viun11g02622 590 Pfam 50S ribosome-binding GTPase 323 389 IPR006073 GO:0005525
Viun11g02622 590 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 386 IPR027417 -
Viun11g02622 590 Gene3D - 201 386 IPR027417 -
Viun11g02622 590 CDD YqeH 170 382 - -
Viun11g02622 590 MobiDBLite consensus disorder prediction 562 590 - -
Viun11g02622 590 Coils Coil 590 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02622 Viun-Chr11 39157741 39161355 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02622 - - pvu:PHAVU_011G030900g 1100.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02622 11 39157741 39161355 Viun11g02622 11 39157741 39161355 ECH