Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02605 ATGATTCTGCAACACGCTTCTTCCATTTCACACTTCTCTTCACTCTCCCCTTCTCTCTGTCCCTGTAACGCGGCATTTCCTTTCTCCAGAAGAACCAGAAAGCGCTTATTCGCCAATTTCGGTTCCCGAAAATTCCGCAGAAAACGCACCGTTCGATTCTGCGCCCTTCCCTCCGACGCTTCCAACCCAAACTGGAATTCCGAATTCGCCAGTGCCGCGCGGAGAACCGCCGCAACCTTCGTTCTCAAACGAATTTCCGATGAACTCCACCAAGACAGCAACGGCAACAGCGATGTTGATGAAACGGAGCTGGATGATTCACCTTCGCCGTCCTCGTCGTCGTCGCCGCCGTCGGCGGCGGTTCAATTAGGTTCAAACTTCACCGGTTTCCGCGAGGATCCTATTGTGGATAAGCTGAGGACGCAGCTTGGGGTCATTCACCCGATTCCGTCGCCTCCGATTAACCGCAACGTGGTCGGCTTGTTCGTGTTCTTCTTCTTCGTCGGCGTGGTGTTTGATAAACTGTGGACTTCGCGGCGGCGGAGCAAGAGCAGCGGCGAGGATGGACTGCGCGGTGTGTGGCCGCAGGTGCCGACGAGCTTTTCGTTGTTCCTGGAGAAGGATTTGCAGAGGAAGGAGTCGGTGGAGTGGGTGAACATGGTGTTGGGGAAGTTGTGGAAGGTGTACAGAGGTGGAATTGAGAACTGGATTATAGGGTTGCTTCAGCCTGTGATTGATAATTTGAAGAAGCCTGATTACGTTGAGAGGGTGGAGATTAAGCAGTTCTCGTTAGGAGATGAACCCTTGTCTGTTAGGAATGTTGAGCGCAGGACTTCTCGCAGGGCCAACGATTTGCAGTACCAGATAGGGCTTAGGTACACAGGTGGTGCTCGCATGCTGTTGATGCTTTCTCTGAAATTTGGCATCATTCCAATTGTTGTACCTGTTGGTGTTCGAGATTTTGACATCGATGGCGAACTTTGGGTAAAATTAAGATTAATACCAACGGAACCATGGGTGGGAGCTGTTTCATGGGCTTTTGTTTCACTTCCCAAGATCAAGTTTGAACTGTCCCCATTCCGTCTGTTCAATTTAATGGCAATTCCAGTTCTCTCGATGTTTTTGACTAAACTTCTCACTGAAGATTTACCCAAACTATTTGTACGCCCAAAGAAAATAGTTTTAGATTTCCAAAAAGGAAAAGCTGTGGGTCCAGTTGCTGGTGATGTTAAATCTGGAGAAATGCAAGGAAATAAAGATTCTGTGGGTGAACTATCTGTTACTCTGGTGGATGCTCGAAAACTTTCTTATATTTTCTATGGTAAGACAGATCCTTACGTTGTTCTTGGCCTTGGTGATCAAATTATACGCAGCAAAAAGAACAGTCAAACTACCGTAATTGGACCCCCAGGAATGCCAATTTGGAATCAGGATTTTCACATGCTCGTTTCCAACCCTAGAAAACAGAAGTTATTCATTCAAGTAAAGGACGCTCTAGGATTTGCAGATTTGACTATTGGTACAGGAGAGGTTGATTTGGGATCTCTTAAAGACACTGTACCAACAGACAAAATTGTGGTTTTACAAGGAGGTTGGGGATTTTTAGGAAAGCGCTCTTGTGGCGAGATATTACTTCGGCTAACATATAAAGCTTATGTGGAGGATGAGGAAGATGATAAAACTGAGATGGGCTCCATTTATACTGATGTTTCTGATGACGAGTTGTCTGATTCAGAAACAAATGTCACTGACGAGAGGGAAGAAAGAAATTCTTTGTACGAAACAGATAAAGAGTCATTTATGGATGTTTTGGCAGCATTAATTGTTAGCGAAGAATTTCAGGGGATAGTAGCATCTGAAACAGGGTTTGGCAAAGTTTTGGATAATGGCTCAAATGCTGCGTCTAAAGTGTCAAAGTCTCCGGTTCCCAAGGCTGAACCAACTGCTTCCAGTTCTGATAATTCTGAAGGCTCTGGAGGCTCTGGAGGGTCAGCCTTACTTTGGCTTGCTGTGATTACTAGCATATCACTACTAATTGCTCTCAATGTTGGGGGATCCAATCTCTTCAATCCTTAA 2076 0.4595 MILQHASSISHFSSLSPSLCPCNAAFPFSRRTRKRLFANFGSRKFRRKRTVRFCALPSDASNPNWNSEFASAARRTAATFVLKRISDELHQDSNGNSDVDETELDDSPSPSSSSSPPSAAVQLGSNFTGFREDPIVDKLRTQLGVIHPIPSPPINRNVVGLFVFFFFVGVVFDKLWTSRRRSKSSGEDGLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGLLQPVIDNLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRANDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTEDLPKLFVRPKKIVLDFQKGKAVGPVAGDVKSGEMQGNKDSVGELSVTLVDARKLSYIFYGKTDPYVVLGLGDQIIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPRKQKLFIQVKDALGFADLTIGTGEVDLGSLKDTVPTDKIVVLQGGWGFLGKRSCGEILLRLTYKAYVEDEEDDKTEMGSIYTDVSDDELSDSETNVTDEREERNSLYETDKESFMDVLAALIVSEEFQGIVASETGFGKVLDNGSNAASKVSKSPVPKAEPTASSSDNSEGSGGSGGSALLWLAVITSISLLIALNVGGSNLFNP 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02605 691 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 44 691 - -
Viun11g02605 691 MobiDBLite consensus disorder prediction 631 659 - -
Viun11g02605 691 MobiDBLite consensus disorder prediction 91 121 - -
Viun11g02605 691 CDD SMP_SF 233 396 - -
Viun11g02605 691 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 211 398 IPR031468 GO:0008289
Viun11g02605 691 Gene3D C2 domain 405 552 IPR035892 -
Viun11g02605 691 Pfam C2 domain 423 521 IPR000008 -
Viun11g02605 691 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 423 551 IPR035892 -
Viun11g02605 691 MobiDBLite consensus disorder prediction 560 590 - -
Viun11g02605 691 SMART C2_3c 424 525 IPR000008 -
Viun11g02605 691 ProSiteProfiles C2 domain profile. 411 526 IPR000008 -
Viun11g02605 691 MobiDBLite consensus disorder prediction 106 121 - -
Viun11g02605 691 CDD C2 425 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02605 Viun-Chr11 39072101 39080083 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02605 - - gmx:100817508 1081.63